Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS06555

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
1,433,145	+				+0.2
1,433,145	+				-0.4
1,433,145	+				-0.7
1,433,163	-				+0.3
1,433,173	+				+0.8
1,433,174	-				+0.6
1,433,174	-				+0.3
1,433,198	-		RR42_RS06550	0.14	+1.8
1,433,446	+		RR42_RS06550	0.59	-0.1
1,433,446	+		RR42_RS06550	0.59	+0.1
1,433,447	-		RR42_RS06550	0.59	+0.3
1,433,515	+		RR42_RS06550	0.72	+0.6
1,433,515	+		RR42_RS06550	0.72	-2.2
1,433,515	+		RR42_RS06550	0.72	+0.2
1,433,516	-		RR42_RS06550	0.72	+0.1
1,433,520	+		RR42_RS06550	0.73	-1.0
1,433,520	+		RR42_RS06550	0.73	-2.6
1,433,520	+		RR42_RS06550	0.73	+0.1
1,433,520	+		RR42_RS06550	0.73	+0.5
1,433,520	+		RR42_RS06550	0.73	-2.2
1,433,653	+				+0.6
1,433,675	+				+0.8
1,433,675	+				+0.0
1,433,676	-				-0.1
1,433,679	+				+0.6
1,433,679	+				+0.1
1,433,679	+				+0.7
1,433,679	+				+0.1
1,433,679	+				+0.1
1,433,680	-				+1.0
1,433,680	-				+0.3
1,433,680	-				+0.8
1,433,680	-				-1.1
1,433,685	+				-0.6
1,433,685	+				-0.5
1,433,686	-				-0.2
1,433,690	-				+0.1
1,433,715	+				-2.2
1,433,715	+				-2.9
1,433,715	+				+0.4
1,433,765	+				+1.6
1,434,108	-		RR42_RS06555	0.38	+2.0
1,434,136	+		RR42_RS06555	0.42	-0.5
1,434,266	+		RR42_RS06555	0.60	+1.4
1,434,266	+		RR42_RS06555	0.60	+0.9
1,434,314	+		RR42_RS06555	0.67	-0.1
1,434,314	+		RR42_RS06555	0.67	+2.1
1,434,314	+		RR42_RS06555	0.67	+0.9
1,434,314	+		RR42_RS06555	0.67	+1.1
1,434,314	+		RR42_RS06555	0.67	+0.1
1,434,314	+		RR42_RS06555	0.67	-1.2
1,434,616	+				+0.6
1,434,616	+				+1.1
1,434,616	+				+0.9
1,434,617	-				+0.6
1,434,617	-				+1.7
1,434,617	-				-0.0
1,434,617	-				+0.9
1,435,309	+				-0.2
1,435,309	+				+0.1
1,435,310	-				+0.1
1,435,310	-				-0.1