Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS06525

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
1,427,563	+		RR42_RS06520	0.35	-2.5
1,427,564	-		RR42_RS06520	0.35	-0.0
1,427,564	-		RR42_RS06520	0.35	-0.9
1,427,564	-		RR42_RS06520	0.35	+0.2
1,427,638	+		RR42_RS06520	0.45	+1.4
1,427,792	+		RR42_RS06520	0.64	-0.2
1,427,792	+		RR42_RS06520	0.64	+0.3
1,427,793	-		RR42_RS06520	0.64	-1.8
1,427,888	+		RR42_RS06520	0.76	-0.5
1,427,888	+		RR42_RS06520	0.76	-0.4
1,427,888	+		RR42_RS06520	0.76	-0.9
1,428,071	+				+0.8
1,428,176	+				+0.4
1,428,344	-				-0.4
1,428,344	-				-2.2
1,428,544	+		RR42_RS06525	0.17	+0.4
1,428,545	-		RR42_RS06525	0.17	-0.3
1,428,628	-		RR42_RS06525	0.31	-1.2
1,428,628	-		RR42_RS06525	0.31	+0.6
1,428,864	+		RR42_RS06525	0.69	-0.2
1,428,864	+		RR42_RS06525	0.69	+0.3
1,428,865	-		RR42_RS06525	0.70	-1.5
1,428,865	-		RR42_RS06525	0.70	-0.5
1,428,865	-		RR42_RS06525	0.70	+1.1
1,428,865	-		RR42_RS06525	0.70	-0.2
1,428,913	-		RR42_RS06525	0.78	-0.1
1,428,967	+		RR42_RS06525	0.86	-1.4
1,429,223	+		RR42_RS06530	0.14	+0.1
1,429,223	+		RR42_RS06530	0.14	-0.0
1,429,224	-		RR42_RS06530	0.14	-0.2
1,429,224	-		RR42_RS06530	0.14	-1.4
1,429,224	-		RR42_RS06530	0.14	-0.1
1,429,224	-		RR42_RS06530	0.14	-0.2
1,429,538	+		RR42_RS06530	0.38	-0.6
1,429,538	+		RR42_RS06530	0.38	+0.1
1,429,538	+		RR42_RS06530	0.38	-0.3
1,429,539	-		RR42_RS06530	0.38	-0.4
1,429,539	-		RR42_RS06530	0.38	+0.1
1,429,539	-		RR42_RS06530	0.38	+0.3
1,429,539	-		RR42_RS06530	0.38	-2.4
1,429,540	+		RR42_RS06530	0.38	+0.7
1,429,540	+		RR42_RS06530	0.38	+0.3
1,429,540	+		RR42_RS06530	0.38	+2.1
1,429,657	+		RR42_RS06530	0.47	-0.5
1,429,658	-		RR42_RS06530	0.47	+0.6
1,429,658	-		RR42_RS06530	0.47	+0.0
1,429,658	-		RR42_RS06530	0.47	+0.1
1,429,808	+		RR42_RS06530	0.58	-1.0
1,429,809	-		RR42_RS06530	0.58	+1.4
1,429,836	-		RR42_RS06530	0.61	-0.2