Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS05705

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
1,253,897	+		RR42_RS05700	0.21	-0.1
1,254,050	+		RR42_RS05700	0.60	-0.8
1,254,050	+		RR42_RS05700	0.60	-2.0
1,254,050	+		RR42_RS05700	0.60	-1.4
1,254,050	+		RR42_RS05700	0.60	+1.7
1,254,051	-		RR42_RS05700	0.60	+0.1
1,254,051	-		RR42_RS05700	0.60	-0.5
1,254,097	+		RR42_RS05700	0.72	-1.0
1,254,097	+		RR42_RS05700	0.72	-0.3
1,254,214	+				+1.0
1,254,214	+				-0.2
1,254,214	+				-0.9
1,254,240	-				-1.6
1,254,287	-				+0.4
1,254,287	-				-1.5
1,254,287	-				+0.4
1,254,356	+				-1.0
1,254,356	+				-0.3
1,254,356	+				-0.3
1,254,357	-				-0.7
1,254,357	-				-2.3
1,254,439	+				+1.0
1,254,458	+				+0.9
1,254,459	-				-0.1
1,254,459	-				-0.5
1,254,461	+				+0.1
1,254,461	+				-2.8
1,254,462	-				+0.1
1,254,555	+				-0.9
1,254,555	+				-1.4
1,254,555	+				-3.0
1,254,556	-				+0.1
1,254,592	-				-1.0
1,254,602	+				-0.9
1,254,626	+				-0.1
1,254,627	-				+0.5
1,254,709	+		RR42_RS05705	0.12	-0.7
1,254,709	+		RR42_RS05705	0.12	+0.0
1,254,709	+		RR42_RS05705	0.12	-0.0
1,254,710	-		RR42_RS05705	0.12	-0.5
1,254,710	-		RR42_RS05705	0.12	-0.6
1,254,710	-		RR42_RS05705	0.12	+1.1
1,254,753	+		RR42_RS05705	0.17	+0.4
1,254,753	+		RR42_RS05705	0.17	-0.9
1,254,753	+		RR42_RS05705	0.17	+0.7
1,254,753	+		RR42_RS05705	0.17	-0.4
1,254,754	-		RR42_RS05705	0.17	+0.8
1,254,754	-		RR42_RS05705	0.17	+0.3
1,254,754	-		RR42_RS05705	0.17	+0.9
1,254,888	+		RR42_RS05705	0.35	-0.1
1,254,888	+		RR42_RS05705	0.35	-0.4
1,254,889	-		RR42_RS05705	0.35	-0.5
1,254,889	-		RR42_RS05705	0.35	+0.0
1,255,005	+		RR42_RS05705	0.50	-2.2
1,255,005	+				-0.5
1,255,005	+		RR42_RS05705	0.50	-1.5
1,255,006	-		RR42_RS05705	0.51	-0.3
1,255,006	-		RR42_RS05705	0.51	-0.3
1,255,183	+		RR42_RS05705	0.74	+1.5
1,255,233	+		RR42_RS05705	0.80	+0.9
1,255,234	-		RR42_RS05705	0.80	+0.7
1,255,234	-		RR42_RS05705	0.80	+0.1
1,255,730	-		RR42_RS05710	0.45	+0.3
1,255,750	+		RR42_RS05710	0.48	+1.7
1,255,750	+		RR42_RS05710	0.48	-1.3
1,255,750	+		RR42_RS05710	0.48	-0.0
1,255,750	+		RR42_RS05710	0.48	-0.8
1,255,750	+		RR42_RS05710	0.48	+0.5
1,255,750	+		RR42_RS05710	0.48	-0.5
1,255,750	+		RR42_RS05710	0.48	-1.5
1,255,750	+		RR42_RS05710	0.48	-1.1
1,255,751	-		RR42_RS05710	0.48	+0.6
1,255,751	-		RR42_RS05710	0.48	-0.1
1,255,751	-		RR42_RS05710	0.48	-1.1
1,255,751	-		RR42_RS05710	0.48	-0.2
1,255,828	+		RR42_RS05710	0.59	+0.3
1,255,828	+		RR42_RS05710	0.59	-1.0
1,255,829	-		RR42_RS05710	0.60	+0.1
1,255,880	-		RR42_RS05710	0.67	+1.1
1,256,032	+		RR42_RS05710	0.89	-2.6
1,256,033	-		RR42_RS05710	0.89	+1.4
1,256,033	-		RR42_RS05710	0.89	+0.4
1,256,095	+				-1.6
1,256,185	+				+1.3
1,256,185	+				+0.6
1,256,185	+				+1.6
1,256,299	-				+3.5