Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS04045

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
895,828	+				-0.4
895,828	+				-1.9
895,828	+				-0.6
895,842	-				-2.6
895,871	-				-0.4
895,894	+				-1.6
895,895	-				-1.7
895,936	-				-1.6
895,936	-				-2.4
896,070	+				+0.0
896,070	+				-0.1
896,070	+				+0.8
896,071	-				+1.2
896,071	-				+0.4
896,080	+				-2.7
896,080	+				-2.2
896,080	+				-0.2
896,139	-				-0.7
896,139	-				-0.7
896,139	-				+1.0
896,196	+				-1.0
896,196	+				+0.1
896,196	+				+0.5
896,197	-				+0.5
896,197	-				-0.1
896,197	-				-3.0
896,198	+				+0.4
896,198	+				-0.1
896,198	+				-0.7
896,202	+				+0.5
896,202	+				-0.4
896,203	-				-3.1
896,203	-				-0.9
896,203	-				-0.2
896,203	-				-0.5
896,203	-				+1.3
896,203	-				+0.3
896,269	+		RR42_RS04040	0.10	-0.1
896,270	-		RR42_RS04040	0.11	-0.1
896,459	-		RR42_RS04040	0.76	+0.9
896,459	-		RR42_RS04040	0.76	-2.0
896,459	-		RR42_RS04040	0.76	-3.0
896,459	-		RR42_RS04040	0.76	+0.4
896,500	+				-1.3
896,501	-				+0.6
896,561	+				-2.0
896,561	+				+0.0
896,561	+				-1.9
896,995	-		RR42_RS04045	0.57	-1.1
896,995	-		RR42_RS04045	0.57	+0.1
897,196	+		RR42_RS04045	0.90	+0.2
897,196	+		RR42_RS04045	0.90	-0.3
897,197	-				-0.3
897,282	+				-0.0
897,433	-		RR42_RS04050	0.18	-0.5
897,881	+		RR42_RS04050	0.80	-1.6
897,973	+				-2.6
898,026	+				-0.1
898,027	-				-0.3
898,063	-				-1.7
898,242	-				+0.4
898,243	+				-0.7
898,243	+				+0.5