Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS03865
Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source Deoxyribonucleic from herring sperm 5 mg/mL |
---|---|---|---|---|---|
remove | |||||
853,068 | + | RR42_RS03860 | 0.21 | +0.0 | |
853,069 | - | RR42_RS03860 | 0.21 | -0.1 | |
853,069 | - | RR42_RS03860 | 0.21 | +0.2 | |
853,076 | + | RR42_RS03860 | 0.22 | -0.9 | |
853,203 | + | RR42_RS03860 | 0.34 | -0.8 | |
853,769 | + | RR42_RS03860 | 0.86 | -0.3 | |
853,769 | + | RR42_RS03860 | 0.86 | -1.4 | |
853,770 | - | RR42_RS03860 | 0.86 | +0.2 | |
853,770 | - | RR42_RS03860 | 0.86 | -1.0 | |
853,770 | - | RR42_RS03860 | 0.86 | +2.1 | |
853,774 | - | RR42_RS03860 | 0.86 | -0.1 | |
853,963 | + | +0.3 | |||
854,031 | - | +0.4 | |||
854,083 | - | -1.0 | |||
854,245 | - | RR42_RS03865 | 0.25 | -1.4 | |
854,245 | - | RR42_RS03865 | 0.25 | -1.2 | |
854,651 | - | RR42_RS03865 | 0.68 | -0.7 | |
854,836 | + | RR42_RS03865 | 0.87 | -1.6 | |
854,836 | + | RR42_RS03865 | 0.87 | +0.9 | |
854,837 | - | RR42_RS03865 | 0.87 | +0.0 | |
854,990 | + | +0.3 | |||
854,993 | - | -0.7 | |||
855,080 | - | -0.0 | |||
855,080 | - | +0.0 | |||
855,081 | + | -2.6 | |||
855,440 | + | -1.5 | |||
855,440 | + | +0.3 | |||
855,440 | + | -0.7 | |||
855,515 | + | RR42_RS03875 | 0.16 | +0.6 | |
855,516 | - | RR42_RS03875 | 0.16 | +0.3 |
Or see this region's nucleotide sequence