Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS03790 and RR42_RS03795 are separated by 139 nucleotides RR42_RS03795 and RR42_RS03800 are separated by 22 nucleotides RR42_RS03800 and RR42_RS03805 are separated by 73 nucleotides
RR42_RS03790: RR42_RS03790 - molybdenum cofactor biosynthesis protein MoaA, at 837,226 to 837,480
_RS03790
RR42_RS03795: RR42_RS03795 - tyrosine protein phosphatase, at 837,620 to 838,336
_RS03795
RR42_RS03800: RR42_RS03800 - acetate kinase, at 838,359 to 839,585
_RS03800
RR42_RS03805: RR42_RS03805 - phosphate acetyltransferase, at 839,659 to 840,600
_RS03805
Position (kb) 838
839
840 Strain fitness (log2 ratio) -2
-1
0
1
2 at 837.427 kb on + strand, within RR42_RS03790 at 837.429 kb on + strand, within RR42_RS03790 at 837.429 kb on + strand, within RR42_RS03790 at 837.429 kb on + strand, within RR42_RS03790 at 837.429 kb on + strand, within RR42_RS03790 at 837.931 kb on + strand, within RR42_RS03795 at 837.932 kb on + strand, within RR42_RS03795 at 837.953 kb on + strand, within RR42_RS03795 at 837.953 kb on + strand, within RR42_RS03795 at 838.010 kb on + strand, within RR42_RS03795 at 838.103 kb on + strand, within RR42_RS03795 at 838.104 kb on - strand, within RR42_RS03795 at 838.319 kb on + strand at 838.360 kb on + strand at 838.361 kb on - strand at 838.753 kb on + strand, within RR42_RS03800 at 838.754 kb on - strand, within RR42_RS03800 at 838.754 kb on - strand, within RR42_RS03800 at 838.996 kb on + strand, within RR42_RS03800 at 838.996 kb on + strand, within RR42_RS03800 at 838.997 kb on - strand, within RR42_RS03800 at 838.997 kb on - strand, within RR42_RS03800 at 838.997 kb on - strand, within RR42_RS03800 at 839.003 kb on - strand, within RR42_RS03800 at 839.047 kb on + strand, within RR42_RS03800 at 839.055 kb on - strand, within RR42_RS03800 at 839.221 kb on - strand, within RR42_RS03800 at 839.274 kb on + strand, within RR42_RS03800 at 839.275 kb on - strand, within RR42_RS03800 at 839.519 kb on - strand at 840.157 kb on - strand, within RR42_RS03805 at 840.578 kb on + strand at 840.579 kb on - strand at 840.579 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Deoxyribonucleic from herring sperm 5 mg/mL remove 837,427 + RR42_RS03790 0.79 +0.9 837,429 + RR42_RS03790 0.80 -0.3 837,429 + RR42_RS03790 0.80 -0.0 837,429 + RR42_RS03790 0.80 +1.1 837,429 + RR42_RS03790 0.80 -2.0 837,931 + RR42_RS03795 0.43 -0.2 837,932 + RR42_RS03795 0.44 +0.4 837,953 + RR42_RS03795 0.46 +0.7 837,953 + RR42_RS03795 0.46 -0.3 838,010 + RR42_RS03795 0.54 +1.3 838,103 + RR42_RS03795 0.67 +0.7 838,104 - RR42_RS03795 0.68 +1.3 838,319 + +0.1 838,360 + -1.2 838,361 - +0.9 838,753 + RR42_RS03800 0.32 -1.9 838,754 - RR42_RS03800 0.32 -1.2 838,754 - RR42_RS03800 0.32 -0.1 838,996 + RR42_RS03800 0.52 +1.0 838,996 + RR42_RS03800 0.52 +0.2 838,997 - RR42_RS03800 0.52 +1.0 838,997 - RR42_RS03800 0.52 -1.3 838,997 - RR42_RS03800 0.52 -0.8 839,003 - RR42_RS03800 0.52 +2.1 839,047 + RR42_RS03800 0.56 +0.4 839,055 - RR42_RS03800 0.57 +1.1 839,221 - RR42_RS03800 0.70 +1.3 839,274 + RR42_RS03800 0.75 -0.1 839,275 - RR42_RS03800 0.75 -1.6 839,519 - +0.6 840,157 - RR42_RS03805 0.53 +1.0 840,578 + +0.1 840,579 - +0.3 840,579 - -0.1
Or see this region's nucleotide sequence