Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS00425

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
111,227	-		RR42_RS00415	0.72	-1.1
111,227	-		RR42_RS00415	0.72	-1.9
111,262	+		RR42_RS00415	0.76	-1.4
111,262	+		RR42_RS00415	0.76	-0.1
111,262	+		RR42_RS00415	0.76	+2.4
111,263	-		RR42_RS00415	0.76	+0.3
111,263	-		RR42_RS00415	0.76	-0.4
111,263	-		RR42_RS00415	0.76	-0.9
111,362	+		RR42_RS00415	0.88	+0.2
111,363	-		RR42_RS00415	0.88	+0.6
111,496	-				-1.2
111,616	+				-0.1
111,616	+				-0.4
111,796	+		RR42_RS00420	0.69	+0.2
111,797	-		RR42_RS00420	0.70	-1.7
111,797	-		RR42_RS00420	0.70	-0.1
111,807	+		RR42_RS00420	0.73	-1.7
111,807	+		RR42_RS00420	0.73	+1.4
111,808	-		RR42_RS00420	0.74	+0.2
111,883	-				+0.2
112,129	-		RR42_RS00425	0.12	-0.8
112,374	+		RR42_RS00425	0.36	+0.3
112,375	-		RR42_RS00425	0.36	-0.9
112,375	-		RR42_RS00425	0.36	-1.4
112,375	-		RR42_RS00425	0.36	-0.5
112,375	-		RR42_RS00425	0.36	-0.5
112,599	+		RR42_RS00425	0.58	-0.0
113,082	+				+0.1
113,082	+				-0.9
113,082	+				+1.0
113,082	+				-1.1
113,082	+				-0.3
113,083	-				-1.1
113,083	-				+0.3
113,083	-				+0.9
113,332	-		RR42_RS00430	0.42	-1.0
113,601	+		RR42_RS00430	0.81	-1.0
113,602	-		RR42_RS00430	0.81	+0.8
113,773	-				-0.8
113,862	+				+0.4
113,863	-				+0.9
113,863	-				+0.7
113,917	+				-1.6
113,966	+				+1.0
113,966	+				+0.7
113,966	+				-0.8