Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS00170

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
58,236	+				-0.0
58,236	+				-0.4
58,236	+				+1.2
58,237	-				+0.4
58,351	+				-1.9
58,352	-				+1.4
58,352	-				-1.7
58,352	-				+1.2
58,352	-				+0.0
58,353	-				+0.4
58,434	-				+1.4
58,471	-				+0.6
58,521	+				-1.7
58,521	+				+1.4
58,522	-				+0.7
58,671	-				-1.1
58,719	+				+0.1
58,720	-				-2.7
58,804	+				+0.2
58,804	+				-0.7
58,804	+				+0.2
58,804	+				+0.0
58,866	-				+1.2
58,866	-				-0.5
58,868	+				+1.0
58,943	+				+0.3
58,943	+				-2.9
58,943	+				-2.5
58,987	+				-0.1
58,987	+				-0.5
58,987	+				+0.2
58,988	-				-0.4
58,988	-				+0.0
59,012	-				+0.2
59,015	+				+3.0
59,021	+				-0.8
59,108	+				+0.2
59,135	+				-1.4
59,136	-				-1.0
59,136	-				-0.7
59,142	+				+0.2
59,228	-		RR42_RS00170	0.16	-0.3
59,247	-		RR42_RS00170	0.19	-0.8
59,255	-		RR42_RS00170	0.21	-0.1
59,335	+		RR42_RS00170	0.36	-1.7
59,335	+		RR42_RS00170	0.36	+0.4
59,336	-		RR42_RS00170	0.36	+0.4
59,336	-		RR42_RS00170	0.36	+0.3
59,336	-		RR42_RS00170	0.36	+0.4
59,385	+		RR42_RS00170	0.45	+0.0
59,386	-		RR42_RS00170	0.45	-1.5
59,426	+		RR42_RS00170	0.52	+0.4
59,426	+		RR42_RS00170	0.52	-1.9
59,539	+		RR42_RS00170	0.73	-0.9
59,554	+		RR42_RS00170	0.76	+1.2
59,570	+		RR42_RS00170	0.79	+0.2
59,570	+		RR42_RS00170	0.79	-0.6
59,571	-		RR42_RS00170	0.79	-0.6
59,581	+		RR42_RS00170	0.81	-2.1
59,584	+		RR42_RS00170	0.81	-0.6
59,603	+		RR42_RS00170	0.85	+2.2
59,604	-		RR42_RS00170	0.85	-0.3
59,636	+				+1.4
59,636	+				+0.9
59,643	+				+0.2
59,644	-				+1.7
59,653	-				-1.1
59,653	-				+0.2
59,709	+				-1.0
59,710	-				+0.9
59,710	-				-0.6
59,725	+				-0.0
59,725	+				+0.5
59,752	+				-0.2
59,753	-				+0.3
59,768	+				-0.2
59,790	+				+0.9
59,790	+				-1.3
59,791	-				-0.6
59,889	-				+0.7
59,889	-				+0.3
59,898	+				-0.4
59,898	+				-0.2
59,899	-				-1.7
59,899	-				-0.1
59,899	-				-0.9
59,899	-				-1.7
59,899	-				-0.2
59,928	+		RR42_RS00175	0.12	-0.6
60,007	+		RR42_RS00175	0.21	-0.8
60,007	+		RR42_RS00175	0.21	+0.4
60,061	+		RR42_RS00175	0.28	+0.8
60,061	+		RR42_RS00175	0.28	-0.8
60,061	+		RR42_RS00175	0.28	-0.6
60,061	+		RR42_RS00175	0.28	-1.0
60,061	+		RR42_RS00175	0.28	+1.0
60,061	+		RR42_RS00175	0.28	+0.9
60,062	-		RR42_RS00175	0.28	+1.7
60,062	-		RR42_RS00175	0.28	+0.8
60,062	-		RR42_RS00175	0.28	-1.4
60,318	+		RR42_RS00175	0.60	+1.9
60,358	-		RR42_RS00175	0.65	+0.9
60,358	-		RR42_RS00175	0.65	-0.6
60,358	-		RR42_RS00175	0.65	+1.0
60,453	+		RR42_RS00175	0.77	-0.4
60,454	-		RR42_RS00175	0.77	-0.8
60,454	-		RR42_RS00175	0.77	+0.9
60,454	-		RR42_RS00175	0.77	+0.6
60,454	-		RR42_RS00175	0.77	-1.6
60,483	+		RR42_RS00175	0.81	-2.0
60,514	-		RR42_RS00175	0.85	+0.1
60,577	+				+1.2
60,596	-				+0.9