Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c23270

Experiment: L-Methionine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Methionine (N)
2,414,191	+				+1.1
2,414,214	+		PGA1_c23260	0.12	-0.7
2,414,214	+		PGA1_c23260	0.12	-0.6
2,414,217	-		PGA1_c23260	0.12	+0.2
2,414,217	-		PGA1_c23260	0.12	-1.2
2,414,272	-		PGA1_c23260	0.18	-0.3
2,414,284	+		PGA1_c23260	0.19	-0.9
2,414,303	-		PGA1_c23260	0.21	+0.6
2,414,317	+		PGA1_c23260	0.23	-0.0
2,414,317	+		PGA1_c23260	0.23	+0.4
2,414,317	+		PGA1_c23260	0.23	-1.0
2,414,325	-		PGA1_c23260	0.24	-1.0
2,414,328	-		PGA1_c23260	0.24	+0.2
2,414,328	-		PGA1_c23260	0.24	-0.1
2,414,330	-		PGA1_c23260	0.24	+1.8
2,414,335	+		PGA1_c23260	0.25	+0.2
2,414,341	+		PGA1_c23260	0.25	-0.6
2,414,394	+		PGA1_c23260	0.31	+0.4
2,414,407	+		PGA1_c23260	0.32	-0.4
2,414,449	+		PGA1_c23260	0.37	+0.1
2,414,458	-		PGA1_c23260	0.38	+0.3
2,414,471	-		PGA1_c23260	0.39	-0.4
2,414,486	-		PGA1_c23260	0.41	-0.4
2,414,504	+		PGA1_c23260	0.42	-0.6
2,414,512	-		PGA1_c23260	0.43	-0.3
2,414,512	-		PGA1_c23260	0.43	-0.5
2,414,512	-		PGA1_c23260	0.43	-1.4
2,414,524	+		PGA1_c23260	0.45	+0.4
2,414,534	+		PGA1_c23260	0.46	-0.1
2,414,542	-		PGA1_c23260	0.46	-0.8
2,414,577	+		PGA1_c23260	0.50	+0.3
2,414,709	+		PGA1_c23260	0.64	+0.5
2,414,724	+		PGA1_c23260	0.66	+0.8
2,414,724	+		PGA1_c23260	0.66	+0.2
2,414,767	+		PGA1_c23260	0.70	-0.1
2,414,772	+		PGA1_c23260	0.71	-0.0
2,414,780	-		PGA1_c23260	0.72	-1.7
2,414,782	+		PGA1_c23260	0.72	-0.8
2,414,782	+		PGA1_c23260	0.72	+0.1
2,414,782	+		PGA1_c23260	0.72	+0.3
2,414,782	+		PGA1_c23260	0.72	-0.8
2,414,782	+		PGA1_c23260	0.72	+1.8
2,414,782	+		PGA1_c23260	0.72	-0.0
2,414,782	+		PGA1_c23260	0.72	-1.0
2,414,782	+		PGA1_c23260	0.72	-0.4
2,414,782	+		PGA1_c23260	0.72	-1.0
2,414,782	+		PGA1_c23260	0.72	-0.1
2,414,782	+		PGA1_c23260	0.72	-1.3
2,414,782	+		PGA1_c23260	0.72	-0.9
2,414,787	+		PGA1_c23260	0.72	-0.4
2,414,790	-		PGA1_c23260	0.73	-0.7
2,414,790	-		PGA1_c23260	0.73	+0.0
2,414,790	-		PGA1_c23260	0.73	-2.6
2,414,790	-		PGA1_c23260	0.73	+0.7
2,414,790	-		PGA1_c23260	0.73	-1.6
2,414,790	-		PGA1_c23260	0.73	-1.6
2,414,790	-		PGA1_c23260	0.73	+0.1
2,414,790	-		PGA1_c23260	0.73	-0.8
2,414,790	-		PGA1_c23260	0.73	+0.4
2,414,790	-		PGA1_c23260	0.73	-1.0
2,414,790	-		PGA1_c23260	0.73	+0.1
2,414,790	-		PGA1_c23260	0.73	-0.8
2,414,790	-		PGA1_c23260	0.73	+0.3
2,414,790	-		PGA1_c23260	0.73	+0.9
2,414,790	-		PGA1_c23260	0.73	-0.0
2,414,790	-		PGA1_c23260	0.73	+0.1
2,414,790	-		PGA1_c23260	0.73	+0.2
2,414,790	-		PGA1_c23260	0.73	+0.2
2,414,790	-		PGA1_c23260	0.73	+0.1
2,414,790	-		PGA1_c23260	0.73	-1.1
2,414,795	-		PGA1_c23260	0.73	-0.5
2,414,813	-		PGA1_c23260	0.75	-0.6
2,414,840	-		PGA1_c23260	0.78	-0.4
2,414,855	-		PGA1_c23260	0.79	-0.1
2,414,862	-		PGA1_c23260	0.80	-0.2
2,414,890	+		PGA1_c23260	0.83	+1.0
2,414,963	+				+1.7
2,414,963	+				+0.3
2,414,999	+				-1.2
2,415,030	-				+0.2
2,415,057	+				+0.3
2,415,057	+				+0.3
2,415,065	-				-2.4
2,415,065	-				-0.2
2,415,148	+				-0.7
2,415,148	+				+0.1
2,415,156	-				-0.7
2,415,195	+				-0.2
2,415,241	-				+0.7
2,415,248	-				+1.2
2,415,273	+		PGA1_c23270	0.11	-0.2
2,415,273	+		PGA1_c23270	0.11	-0.2
2,415,302	+		PGA1_c23270	0.14	+0.2
2,415,371	-		PGA1_c23270	0.21	+1.2
2,415,411	+		PGA1_c23270	0.25	+2.5
2,415,419	+		PGA1_c23270	0.26	+0.4
2,415,443	+		PGA1_c23270	0.28	+0.2
2,415,443	+		PGA1_c23270	0.28	+0.2
2,415,520	+		PGA1_c23270	0.35	+0.9
2,415,558	-		PGA1_c23270	0.39	+1.8
2,415,558	-		PGA1_c23270	0.39	+1.1
2,415,558	-		PGA1_c23270	0.39	+1.0
2,415,563	-		PGA1_c23270	0.40	-0.2
2,415,587	+		PGA1_c23270	0.42	-1.0
2,415,611	+		PGA1_c23270	0.44	+0.5
2,415,618	-		PGA1_c23270	0.45	+0.6
2,415,664	-		PGA1_c23270	0.49	+0.0
2,415,803	-		PGA1_c23270	0.63	+0.1
2,415,835	+		PGA1_c23270	0.66	-0.4
2,415,896	+		PGA1_c23270	0.72	+0.0
2,415,970	+		PGA1_c23270	0.79	+0.8
2,415,977	-		PGA1_c23270	0.80	-0.3
2,415,978	-		PGA1_c23270	0.80	+1.1
2,416,014	+		PGA1_c23270	0.83	+0.2
2,416,014	+		PGA1_c23270	0.83	-0.7
2,416,019	+		PGA1_c23270	0.84	+0.0
2,416,022	-		PGA1_c23270	0.84	+1.9
2,416,024	-		PGA1_c23270	0.84	+0.1
2,416,027	-		PGA1_c23270	0.84	+0.0
2,416,057	+		PGA1_c23270	0.87	-0.1
2,416,060	-		PGA1_c23270	0.88	-0.4
2,416,062	+		PGA1_c23270	0.88	+0.4
2,416,062	+		PGA1_c23270	0.88	-0.8
2,416,143	-				+0.2
2,416,179	+				+0.8
2,416,196	+				-0.2
2,416,208	+				-0.3
2,416,225	+				+0.4
2,416,255	+				+2.2
2,416,261	+				+0.4
2,416,269	-				+0.5
2,416,269	-				+0.4
2,416,269	-				+0.8
2,416,271	+				-1.0
2,416,271	+				-0.7
2,416,343	-				-0.7
2,416,343	-				+0.2
2,416,343	-				+1.8
2,416,350	+				-0.8
2,416,646	+		PGA1_c23280	0.23	+0.1
2,416,647	-		PGA1_c23280	0.23	+1.8
2,416,674	+		PGA1_c23280	0.25	+0.3
2,416,709	+		PGA1_c23280	0.26	+0.1
2,416,709	+		PGA1_c23280	0.26	-0.7
2,416,735	-		PGA1_c23280	0.28	+0.3
2,416,746	+		PGA1_c23280	0.28	-1.0
2,416,752	+		PGA1_c23280	0.28	-0.7
2,416,760	-		PGA1_c23280	0.29	-0.2
2,416,774	-		PGA1_c23280	0.30	+0.5
2,416,790	-		PGA1_c23280	0.30	+0.0
2,416,812	+		PGA1_c23280	0.31	-0.0
2,416,822	-		PGA1_c23280	0.32	+0.7
2,416,827	-		PGA1_c23280	0.32	-0.6
2,416,841	+		PGA1_c23280	0.33	-0.1
2,416,856	-		PGA1_c23280	0.34	+0.4
2,416,864	+		PGA1_c23280	0.34	+0.7
2,416,906	-		PGA1_c23280	0.36	-0.9
2,416,938	+		PGA1_c23280	0.38	-0.9
2,416,942	+		PGA1_c23280	0.38	-0.2
2,416,950	-		PGA1_c23280	0.38	+0.6
2,416,979	-		PGA1_c23280	0.40	-0.5
2,417,080	+		PGA1_c23280	0.45	+0.1
2,417,080	+		PGA1_c23280	0.45	-0.3
2,417,080	+		PGA1_c23280	0.45	+0.0
2,417,159	-		PGA1_c23280	0.49	-0.2
2,417,178	+		PGA1_c23280	0.50	+0.8
2,417,178	+		PGA1_c23280	0.50	+0.0
2,417,183	+		PGA1_c23280	0.50	+0.3
2,417,186	-		PGA1_c23280	0.50	-0.3
2,417,186	-		PGA1_c23280	0.50	-1.2