Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS03925

Experiment: RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS03915 and BWI76_RS03920 are separated by 70 nucleotidesBWI76_RS03920 and BWI76_RS03925 are separated by 32 nucleotidesBWI76_RS03925 and BWI76_RS03930 are separated by 3 nucleotides BWI76_RS03915: BWI76_RS03915 - MurR/RpiR family transcriptional regulator, at 809,174 to 810,037 _RS03915 BWI76_RS03920: BWI76_RS03920 - N-acetyltransferase, at 810,108 to 810,641 _RS03920 BWI76_RS03925: BWI76_RS03925 - N-acetyltransferase GCN5, at 810,674 to 811,510 _RS03925 BWI76_RS03930: BWI76_RS03930 - MFS transporter, at 811,514 to 812,875 _RS03930 Position (kb) 810 811 812Strain fitness (log2 ratio) -2 -1 0 1 2at 809.718 kb on + strand, within BWI76_RS03915at 809.768 kb on - strand, within BWI76_RS03915at 809.998 kb on + strandat 810.120 kb on + strandat 810.158 kb on - strandat 810.197 kb on + strand, within BWI76_RS03920at 810.349 kb on - strand, within BWI76_RS03920at 810.421 kb on - strand, within BWI76_RS03920at 810.649 kb on + strandat 810.669 kb on + strandat 810.687 kb on - strandat 810.723 kb on + strandat 810.810 kb on + strand, within BWI76_RS03925at 811.013 kb on - strand, within BWI76_RS03925at 811.067 kb on - strand, within BWI76_RS03925at 811.141 kb on - strand, within BWI76_RS03925at 811.142 kb on - strand, within BWI76_RS03925at 811.274 kb on + strand, within BWI76_RS03925at 811.557 kb on + strandat 811.654 kb on + strand, within BWI76_RS03930at 811.693 kb on - strand, within BWI76_RS03930at 811.693 kb on - strand, within BWI76_RS03930at 811.695 kb on + strand, within BWI76_RS03930at 811.714 kb on + strand, within BWI76_RS03930at 811.770 kb on + strand, within BWI76_RS03930at 811.775 kb on + strand, within BWI76_RS03930at 811.775 kb on + strand, within BWI76_RS03930at 811.845 kb on - strandat 811.851 kb on + strand, within BWI76_RS03930at 811.851 kb on + strand, within BWI76_RS03930at 812.017 kb on - strand, within BWI76_RS03930at 812.054 kb on - strandat 812.059 kb on + strand, within BWI76_RS03930at 812.212 kb on + strand, within BWI76_RS03930at 812.351 kb on - strand, within BWI76_RS03930at 812.358 kb on + strand, within BWI76_RS03930at 812.366 kb on - strand, within BWI76_RS03930at 812.366 kb on - strand, within BWI76_RS03930at 812.432 kb on - strand, within BWI76_RS03930at 812.509 kb on + strand, within BWI76_RS03930

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Per-strain Table

Position Strand Gene LocusTag Fraction RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x
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809,718 + BWI76_RS03915 0.63 +0.8
809,768 - BWI76_RS03915 0.69 -0.2
809,998 + -0.3
810,120 + -0.1
810,158 - -0.7
810,197 + BWI76_RS03920 0.17 -0.9
810,349 - BWI76_RS03920 0.45 +0.8
810,421 - BWI76_RS03920 0.59 +0.0
810,649 + +1.0
810,669 + +1.3
810,687 - -1.0
810,723 + -0.9
810,810 + BWI76_RS03925 0.16 -0.3
811,013 - BWI76_RS03925 0.41 -0.2
811,067 - BWI76_RS03925 0.47 +0.1
811,141 - BWI76_RS03925 0.56 -1.7
811,142 - BWI76_RS03925 0.56 -0.5
811,274 + BWI76_RS03925 0.72 -2.5
811,557 + -0.2
811,654 + BWI76_RS03930 0.10 -1.2
811,693 - BWI76_RS03930 0.13 -0.0
811,693 - BWI76_RS03930 0.13 +0.2
811,695 + BWI76_RS03930 0.13 +0.4
811,714 + BWI76_RS03930 0.15 -0.6
811,770 + BWI76_RS03930 0.19 -1.4
811,775 + BWI76_RS03930 0.19 +2.3
811,775 + BWI76_RS03930 0.19 -0.5
811,845 - +0.2
811,851 + BWI76_RS03930 0.25 +0.5
811,851 + BWI76_RS03930 0.25 +0.8
812,017 - BWI76_RS03930 0.37 -0.2
812,054 - +1.6
812,059 + BWI76_RS03930 0.40 +0.1
812,212 + BWI76_RS03930 0.51 -1.1
812,351 - BWI76_RS03930 0.61 -1.6
812,358 + BWI76_RS03930 0.62 +0.9
812,366 - BWI76_RS03930 0.63 -0.1
812,366 - BWI76_RS03930 0.63 +0.0
812,432 - BWI76_RS03930 0.67 -0.6
812,509 + BWI76_RS03930 0.73 +0.9

Or see this region's nucleotide sequence