Experiment: MoLS4 with Putrescine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2650 and DVU2651 are separated by 152 nucleotides DVU2651 and DVU2652 are separated by 192 nucleotides DVU2652 and dacA are separated by 956 nucleotides
DVU2650: DVU2650 - hypothetical protein (TIGR), at 2,765,697 to 2,766,302
DVU2650
DVU2651: DVU2651 - hypothetical protein (TIGR), at 2,766,455 to 2,766,631
DVU2651
DVU2652: DVU2652 - hypothetical protein (TIGR), at 2,766,824 to 2,767,405
DVU2652
DVU2655: dacA - D-alanyl-D-alanine carboxypeptidase family protein (TIGR), at 2,768,362 to 2,769,687
dacA
Position (kb)
2766
2767
2768 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2765.926 kb on + strand, within DVU2650 at 2765.964 kb on - strand, within DVU2650 at 2765.977 kb on + strand, within DVU2650 at 2766.015 kb on + strand, within DVU2650 at 2766.068 kb on - strand, within DVU2650 at 2766.068 kb on - strand, within DVU2650 at 2766.437 kb on - strand at 2766.684 kb on + strand at 2766.703 kb on + strand at 2766.918 kb on - strand, within DVU2652 at 2767.225 kb on - strand, within DVU2652 at 2767.268 kb on + strand, within DVU2652 at 2767.373 kb on + strand at 2767.373 kb on + strand at 2767.381 kb on - strand at 2767.438 kb on - strand at 2767.488 kb on + strand at 2767.488 kb on + strand at 2767.496 kb on - strand at 2767.496 kb on - strand at 2767.681 kb on - strand at 2767.720 kb on + strand at 2767.734 kb on - strand at 2767.741 kb on - strand at 2767.762 kb on + strand at 2767.770 kb on - strand at 2767.788 kb on + strand at 2767.788 kb on + strand at 2767.834 kb on + strand at 2767.837 kb on - strand at 2767.845 kb on - strand at 2767.876 kb on - strand at 2767.934 kb on - strand at 2767.963 kb on + strand at 2767.965 kb on + strand at 2767.999 kb on - strand at 2768.012 kb on - strand at 2768.146 kb on + strand at 2768.204 kb on - strand at 2768.212 kb on - strand at 2768.212 kb on - strand at 2768.312 kb on + strand at 2768.331 kb on - strand at 2768.350 kb on - strand at 2768.378 kb on + strand at 2768.386 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Putrescine (N) remove 2,765,926 + DVU2650 0.38 +0.8 2,765,964 - DVU2650 0.44 -0.5 2,765,977 + DVU2650 0.46 -2.2 2,766,015 + DVU2650 0.52 -0.9 2,766,068 - DVU2650 0.61 -1.3 2,766,068 - DVU2650 0.61 -1.3 2,766,437 - -3.0 2,766,684 + +0.1 2,766,703 + -0.2 2,766,918 - DVU2652 0.16 +0.4 2,767,225 - DVU2652 0.69 +0.5 2,767,268 + DVU2652 0.76 +0.3 2,767,373 + +0.4 2,767,373 + -0.6 2,767,381 - -0.6 2,767,438 - -0.7 2,767,488 + -1.3 2,767,488 + +2.4 2,767,496 - +0.2 2,767,496 - -1.1 2,767,681 - +0.2 2,767,720 + -1.1 2,767,734 - -1.4 2,767,741 - +0.5 2,767,762 + +0.0 2,767,770 - +0.4 2,767,788 + -0.5 2,767,788 + +1.7 2,767,834 + +0.1 2,767,837 - -0.3 2,767,845 - +0.8 2,767,876 - +0.1 2,767,934 - -0.8 2,767,963 + +0.1 2,767,965 + +0.3 2,767,999 - +1.0 2,768,012 - -0.1 2,768,146 + -0.3 2,768,204 - +0.9 2,768,212 - +0.2 2,768,212 - +0.1 2,768,312 + +1.0 2,768,331 - -0.0 2,768,350 - +0.1 2,768,378 + +0.2 2,768,386 - -0.2
Or see this region's nucleotide sequence