Experiment: MoLS4 with Putrescine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0720 and DVU0721 are separated by 139 nucleotides DVU0721 and DVU0722 overlap by 14 nucleotides
DVU0720: DVU0720 - HAMP domain protein (TIGR), at 799,261 to 800,550
DVU0720
DVU0721: DVU0721 - sensory box histidine kinase (TIGR), at 800,690 to 803,455
DVU0721
DVU0722: DVU0722 - response regulator (TIGR), at 803,442 to 804,998
DVU0722
Position (kb) 800
801
802
803
804 Strain fitness (log2 ratio) -1
0
1
2 at 799.717 kb on + strand, within DVU0720 at 799.741 kb on + strand, within DVU0720 at 799.815 kb on + strand, within DVU0720 at 799.840 kb on + strand, within DVU0720 at 800.025 kb on + strand, within DVU0720 at 800.025 kb on + strand, within DVU0720 at 800.126 kb on + strand, within DVU0720 at 800.126 kb on + strand, within DVU0720 at 800.126 kb on + strand, within DVU0720 at 800.126 kb on + strand, within DVU0720 at 800.134 kb on - strand, within DVU0720 at 800.152 kb on + strand, within DVU0720 at 800.180 kb on + strand, within DVU0720 at 800.285 kb on - strand, within DVU0720 at 800.285 kb on - strand, within DVU0720 at 800.290 kb on - strand, within DVU0720 at 800.481 kb on + strand at 800.586 kb on + strand at 800.737 kb on + strand at 800.767 kb on - strand at 800.801 kb on - strand at 800.803 kb on + strand at 800.803 kb on + strand at 800.808 kb on + strand at 800.836 kb on - strand at 800.838 kb on + strand at 800.916 kb on + strand at 800.932 kb on + strand at 801.039 kb on + strand, within DVU0721 at 801.049 kb on + strand, within DVU0721 at 801.106 kb on + strand, within DVU0721 at 801.213 kb on + strand, within DVU0721 at 801.239 kb on - strand, within DVU0721 at 801.330 kb on + strand, within DVU0721 at 801.338 kb on - strand, within DVU0721 at 801.433 kb on - strand, within DVU0721 at 801.518 kb on + strand, within DVU0721 at 801.527 kb on + strand, within DVU0721 at 801.558 kb on - strand, within DVU0721 at 801.584 kb on - strand, within DVU0721 at 801.627 kb on - strand, within DVU0721 at 801.689 kb on + strand, within DVU0721 at 801.744 kb on + strand, within DVU0721 at 801.752 kb on - strand, within DVU0721 at 801.752 kb on - strand, within DVU0721 at 801.873 kb on - strand, within DVU0721 at 801.887 kb on + strand, within DVU0721 at 801.959 kb on + strand, within DVU0721 at 801.969 kb on - strand, within DVU0721 at 802.016 kb on + strand, within DVU0721 at 802.074 kb on + strand, within DVU0721 at 802.261 kb on + strand, within DVU0721 at 802.298 kb on - strand, within DVU0721 at 802.365 kb on - strand, within DVU0721 at 802.365 kb on - strand, within DVU0721 at 802.425 kb on + strand, within DVU0721 at 802.433 kb on - strand, within DVU0721 at 802.474 kb on + strand, within DVU0721 at 802.538 kb on - strand, within DVU0721 at 802.557 kb on + strand, within DVU0721 at 802.711 kb on + strand, within DVU0721 at 802.755 kb on - strand, within DVU0721 at 802.940 kb on - strand, within DVU0721 at 802.985 kb on - strand, within DVU0721 at 803.112 kb on - strand, within DVU0721 at 803.134 kb on - strand, within DVU0721 at 803.156 kb on - strand, within DVU0721 at 803.156 kb on - strand, within DVU0721 at 803.164 kb on + strand, within DVU0721 at 803.391 kb on - strand at 803.391 kb on - strand at 803.462 kb on - strand at 803.523 kb on + strand at 803.571 kb on + strand at 803.617 kb on + strand, within DVU0722 at 803.636 kb on - strand, within DVU0722 at 803.689 kb on + strand, within DVU0722 at 803.769 kb on + strand, within DVU0722 at 803.822 kb on + strand, within DVU0722 at 803.905 kb on + strand, within DVU0722 at 803.944 kb on - strand, within DVU0722 at 804.040 kb on + strand, within DVU0722 at 804.113 kb on + strand, within DVU0722 at 804.113 kb on + strand, within DVU0722 at 804.126 kb on - strand, within DVU0722 at 804.133 kb on + strand, within DVU0722 at 804.257 kb on - strand, within DVU0722 at 804.257 kb on - strand, within DVU0722
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Putrescine (N) remove 799,717 + DVU0720 0.35 -1.0 799,741 + DVU0720 0.37 -0.2 799,815 + DVU0720 0.43 -0.6 799,840 + DVU0720 0.45 +0.4 800,025 + DVU0720 0.59 +0.7 800,025 + DVU0720 0.59 -0.0 800,126 + DVU0720 0.67 -0.4 800,126 + DVU0720 0.67 -0.4 800,126 + DVU0720 0.67 +0.2 800,126 + DVU0720 0.67 +0.5 800,134 - DVU0720 0.68 -0.2 800,152 + DVU0720 0.69 -0.2 800,180 + DVU0720 0.71 -1.2 800,285 - DVU0720 0.79 +1.2 800,285 - DVU0720 0.79 +0.3 800,290 - DVU0720 0.80 +0.1 800,481 + -0.6 800,586 + -0.1 800,737 + +0.3 800,767 - +0.4 800,801 - +0.5 800,803 + +0.2 800,803 + +0.6 800,808 + +0.8 800,836 - +1.0 800,838 + +1.1 800,916 + +1.0 800,932 + -1.3 801,039 + DVU0721 0.13 +0.2 801,049 + DVU0721 0.13 +0.7 801,106 + DVU0721 0.15 +0.2 801,213 + DVU0721 0.19 +0.3 801,239 - DVU0721 0.20 +0.5 801,330 + DVU0721 0.23 +1.0 801,338 - DVU0721 0.23 +0.2 801,433 - DVU0721 0.27 -0.0 801,518 + DVU0721 0.30 -0.6 801,527 + DVU0721 0.30 +2.1 801,558 - DVU0721 0.31 -0.5 801,584 - DVU0721 0.32 +1.5 801,627 - DVU0721 0.34 -0.4 801,689 + DVU0721 0.36 +0.3 801,744 + DVU0721 0.38 +0.9 801,752 - DVU0721 0.38 +0.0 801,752 - DVU0721 0.38 +0.3 801,873 - DVU0721 0.43 -0.1 801,887 + DVU0721 0.43 -0.5 801,959 + DVU0721 0.46 +1.7 801,969 - DVU0721 0.46 -0.0 802,016 + DVU0721 0.48 +0.1 802,074 + DVU0721 0.50 -1.3 802,261 + DVU0721 0.57 +0.4 802,298 - DVU0721 0.58 +0.3 802,365 - DVU0721 0.61 +0.0 802,365 - DVU0721 0.61 -0.1 802,425 + DVU0721 0.63 -0.5 802,433 - DVU0721 0.63 +0.3 802,474 + DVU0721 0.64 +0.1 802,538 - DVU0721 0.67 +0.5 802,557 + DVU0721 0.67 +0.6 802,711 + DVU0721 0.73 +0.2 802,755 - DVU0721 0.75 +0.2 802,940 - DVU0721 0.81 +1.0 802,985 - DVU0721 0.83 +1.1 803,112 - DVU0721 0.88 -0.1 803,134 - DVU0721 0.88 +0.2 803,156 - DVU0721 0.89 +0.3 803,156 - DVU0721 0.89 +0.6 803,164 + DVU0721 0.89 -0.0 803,391 - -1.2 803,391 - +0.7 803,462 - -0.9 803,523 + -1.4 803,571 + -0.3 803,617 + DVU0722 0.11 +0.8 803,636 - DVU0722 0.12 -0.6 803,689 + DVU0722 0.16 -0.1 803,769 + DVU0722 0.21 -0.5 803,822 + DVU0722 0.24 +0.1 803,905 + DVU0722 0.30 +0.3 803,944 - DVU0722 0.32 -0.8 804,040 + DVU0722 0.38 +0.2 804,113 + DVU0722 0.43 +0.3 804,113 + DVU0722 0.43 +0.8 804,126 - DVU0722 0.44 +0.3 804,133 + DVU0722 0.44 -1.0 804,257 - DVU0722 0.52 +0.3 804,257 - DVU0722 0.52 -0.0
Or see this region's nucleotide sequence