Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1936

Experiment: BG11 with Polymyxin B sulfate 0.0001953125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Polymyxin B sulfate 0.0001953125 mg/ml
2,009,266	-				+0.1
2,009,283	-				+4.4
2,009,283	-				+1.6
2,009,304	+				+4.0
2,009,304	+				+4.6
2,009,312	-	pilD	Synpcc7942_1935	0.10	+4.7
2,009,338	+	pilD	Synpcc7942_1935	0.13	+4.4
2,009,346	-	pilD	Synpcc7942_1935	0.14	+4.0
2,009,346	-	pilD	Synpcc7942_1935	0.14	+4.3
2,009,346	-	pilD	Synpcc7942_1935	0.14	+5.0
2,009,346	-	pilD	Synpcc7942_1935	0.14	+5.0
2,009,347	-	pilD	Synpcc7942_1935	0.15	+4.6
2,009,347	-	pilD	Synpcc7942_1935	0.15	+3.8
2,009,360	+	pilD	Synpcc7942_1935	0.16	+4.3
2,009,368	-	pilD	Synpcc7942_1935	0.17	+4.6
2,009,385	+	pilD	Synpcc7942_1935	0.19	+4.7
2,009,395	+	pilD	Synpcc7942_1935	0.21	+4.5
2,009,395	+	pilD	Synpcc7942_1935	0.21	+5.2
2,009,403	-	pilD	Synpcc7942_1935	0.22	+4.2
2,009,403	-	pilD	Synpcc7942_1935	0.22	+3.8
2,009,403	-	pilD	Synpcc7942_1935	0.22	+4.5
2,009,403	-	pilD	Synpcc7942_1935	0.22	+4.9
2,009,432	+	pilD	Synpcc7942_1935	0.25	+3.3
2,009,432	+	pilD	Synpcc7942_1935	0.25	+3.3
2,009,440	-	pilD	Synpcc7942_1935	0.26	+4.3
2,009,516	+	pilD	Synpcc7942_1935	0.36	+4.7
2,009,519	-	pilD	Synpcc7942_1935	0.36	+5.1
2,009,522	-	pilD	Synpcc7942_1935	0.37	+4.0
2,009,557	+	pilD	Synpcc7942_1935	0.41	+4.9
2,009,565	-	pilD	Synpcc7942_1935	0.42	+4.3
2,009,565	-	pilD	Synpcc7942_1935	0.42	+4.8
2,009,567	+	pilD	Synpcc7942_1935	0.42	+4.4
2,009,570	-	pilD	Synpcc7942_1935	0.43	+3.8
2,009,575	-	pilD	Synpcc7942_1935	0.43	+4.8
2,009,608	+	pilD	Synpcc7942_1935	0.48	+4.9
2,009,608	+	pilD	Synpcc7942_1935	0.48	+4.7
2,009,614	+	pilD	Synpcc7942_1935	0.48	+4.7
2,009,616	-				+6.0
2,009,625	+	pilD	Synpcc7942_1935	0.50	+4.6
2,009,646	+	pilD	Synpcc7942_1935	0.52	+4.0
2,009,649	-	pilD	Synpcc7942_1935	0.53	+4.5
2,009,652	+	pilD	Synpcc7942_1935	0.53	+4.9
2,009,659	+	pilD	Synpcc7942_1935	0.54	+5.4
2,009,667	+	pilD	Synpcc7942_1935	0.55	+3.7
2,009,669	+	pilD	Synpcc7942_1935	0.55	+4.3
2,009,669	+	pilD	Synpcc7942_1935	0.55	+4.4
2,009,669	+	pilD	Synpcc7942_1935	0.55	+4.2
2,009,669	-	pilD	Synpcc7942_1935	0.55	+5.9
2,009,731	-	pilD	Synpcc7942_1935	0.63	+4.0
2,009,762	+	pilD	Synpcc7942_1935	0.67	+3.6
2,009,762	+	pilD	Synpcc7942_1935	0.67	+4.1
2,009,777	-	pilD	Synpcc7942_1935	0.69	+4.2
2,009,810	-	pilD	Synpcc7942_1935	0.73	+3.9
2,009,827	+	pilD	Synpcc7942_1935	0.75	+3.1
2,009,845	-	pilD	Synpcc7942_1935	0.78	+4.7
2,009,845	-	pilD	Synpcc7942_1935	0.78	+5.0
2,009,891	+	pilD	Synpcc7942_1935	0.84	+4.7
2,009,904	-	pilD	Synpcc7942_1935	0.85	+5.0
2,009,925	-	pilD	Synpcc7942_1935	0.88	+4.3
2,009,964	+				+4.2
2,009,979	+				+4.5
2,009,987	-				+4.1
2,009,987	-				+4.6
2,010,005	-				+4.4
2,010,044	-				+1.2
2,010,044	-				-2.9
2,010,272	+				-0.8
2,010,348	+				+1.2
2,010,356	-				-0.9
2,010,356	-				+0.4
2,010,384	+				-2.5
2,010,384	+				-1.0
2,010,392	-				+0.4
2,010,449	+				-0.4
2,010,450	-				+0.4
2,010,457	-				-0.8
2,010,487	+	msrA	Synpcc7942_1937	0.13	-2.0
2,010,492	+	msrA	Synpcc7942_1937	0.14	-0.1
2,010,492	+				+2.7
2,010,495	-	msrA	Synpcc7942_1937	0.15	+0.7
2,010,497	+	msrA	Synpcc7942_1937	0.15	-0.5
2,010,497	+	msrA	Synpcc7942_1937	0.15	+0.1
2,010,500	-	msrA	Synpcc7942_1937	0.15	+0.3
2,010,500	-	msrA	Synpcc7942_1937	0.15	-0.3
2,010,510	+	msrA	Synpcc7942_1937	0.17	-1.6
2,010,525	+	msrA	Synpcc7942_1937	0.19	+0.7
2,010,525	+	msrA	Synpcc7942_1937	0.19	+0.0
2,010,527	+	msrA	Synpcc7942_1937	0.19	-0.0
2,010,535	+	msrA	Synpcc7942_1937	0.20	-0.3
2,010,549	-	msrA	Synpcc7942_1937	0.22	+1.5
2,010,551	+	msrA	Synpcc7942_1937	0.22	-0.8
2,010,562	+	msrA	Synpcc7942_1937	0.24	+0.8
2,010,569	+	msrA	Synpcc7942_1937	0.25	+0.4
2,010,570	-	msrA	Synpcc7942_1937	0.25	-0.9
2,010,577	-	msrA	Synpcc7942_1937	0.26	-0.6
2,010,602	+	msrA	Synpcc7942_1937	0.29	-0.3
2,010,617	-	msrA	Synpcc7942_1937	0.31	-0.8
2,010,619	+	msrA	Synpcc7942_1937	0.31	+1.4
2,010,619	+	msrA	Synpcc7942_1937	0.31	+0.4
2,010,619	-	msrA	Synpcc7942_1937	0.31	-0.2
2,010,624	+	msrA	Synpcc7942_1937	0.32	+0.4
2,010,641	-	msrA	Synpcc7942_1937	0.34	-1.3
2,010,643	+	msrA	Synpcc7942_1937	0.35	-0.4
2,010,649	-	msrA	Synpcc7942_1937	0.35	-1.0
2,010,651	-	msrA	Synpcc7942_1937	0.36	-1.2
2,010,651	-	msrA	Synpcc7942_1937	0.36	-2.1
2,010,651	-	msrA	Synpcc7942_1937	0.36	+0.5
2,010,666	-	msrA	Synpcc7942_1937	0.38	-1.9
2,010,676	-	msrA	Synpcc7942_1937	0.39	+0.3
2,010,696	-	msrA	Synpcc7942_1937	0.42	+0.1
2,010,707	-	msrA	Synpcc7942_1937	0.43	-1.1
2,010,709	+	msrA	Synpcc7942_1937	0.43	-0.2
2,010,709	+	msrA	Synpcc7942_1937	0.43	-1.2
2,010,711	+	msrA	Synpcc7942_1937	0.44	+0.9
2,010,711	+	msrA	Synpcc7942_1937	0.44	-0.6
2,010,719	-	msrA	Synpcc7942_1937	0.45	-1.2
2,010,734	-	msrA	Synpcc7942_1937	0.47	-1.7
2,010,761	-	msrA	Synpcc7942_1937	0.50	+1.0
2,010,766	-	msrA	Synpcc7942_1937	0.51	-0.8
2,010,766	-	msrA	Synpcc7942_1937	0.51	-0.6
2,010,786	-	msrA	Synpcc7942_1937	0.54	-1.9
2,010,792	+	msrA	Synpcc7942_1937	0.55	-1.6
2,010,830	-	msrA	Synpcc7942_1937	0.60	+0.2
2,010,832	+				+1.2
2,010,863	+	msrA	Synpcc7942_1937	0.64	-0.6
2,010,871	-	msrA	Synpcc7942_1937	0.65	-0.3
2,010,876	-	msrA	Synpcc7942_1937	0.66	+0.8
2,010,878	+	msrA	Synpcc7942_1937	0.66	-0.2
2,010,884	+	msrA	Synpcc7942_1937	0.67	-2.6
2,010,892	-	msrA	Synpcc7942_1937	0.68	-2.2
2,010,903	+	msrA	Synpcc7942_1937	0.70	-0.4
2,010,915	+	msrA	Synpcc7942_1937	0.71	-0.7
2,010,994	-	msrA	Synpcc7942_1937	0.82	+0.8
2,011,043	-	msrA	Synpcc7942_1937	0.89	+0.8
2,011,069	-				+1.5
2,011,071	+				-1.2
2,011,078	+				-0.5
2,011,082	+				+0.3
2,011,082	+				+0.2
2,011,095	-				+0.3
2,011,145	+				+1.4
2,011,174	-				+1.7
2,011,177	+				-0.1
2,011,177	+				-0.5
2,011,177	+				-2.2
2,011,177	+				+0.4
2,011,182	+				+0.7
2,011,199	+				+1.0
2,011,203	+				+0.5
2,011,239	+				-1.0
2,011,242	-				-2.5