Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1526

Experiment: BG11 with Polymyxin B sulfate 0.0001953125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Polymyxin B sulfate 0.0001953125 mg/ml
1,584,316	-	typA	Synpcc7942_1525	0.51	+0.5
1,584,489	+	typA	Synpcc7942_1525	0.60	+1.2
1,584,489	+	typA	Synpcc7942_1525	0.60	+2.7
1,584,497	-	typA	Synpcc7942_1525	0.61	-0.2
1,584,499	-	typA	Synpcc7942_1525	0.61	-0.4
1,584,501	-	typA	Synpcc7942_1525	0.61	-0.1
1,584,543	-	typA	Synpcc7942_1525	0.63	+2.2
1,584,543	-	typA	Synpcc7942_1525	0.63	+1.5
1,584,543	-	typA	Synpcc7942_1525	0.63	-0.6
1,584,621	-	typA	Synpcc7942_1525	0.68	-0.5
1,584,705	-	typA	Synpcc7942_1525	0.72	+1.2
1,584,880	-	typA	Synpcc7942_1525	0.82	+1.1
1,584,902	+	typA	Synpcc7942_1525	0.83	-0.1
1,584,955	+	typA	Synpcc7942_1525	0.86	-0.2
1,585,061	+				+1.2
1,585,071	-				+0.1
1,585,101	-				+2.3
1,585,102	-				+0.8
1,585,118	-				+1.3
1,585,134	+				-0.1
1,585,188	+				+1.2
1,585,194	+				+1.8
1,585,194	+				-0.1
1,585,194	+				+0.6
1,585,195	+				-1.4
1,585,216	+				+0.6
1,585,216	+				-0.5
1,585,332	-				+0.2
1,585,368	+		Synpcc7942_1526	0.10	-0.5
1,585,387	-		Synpcc7942_1526	0.13	-1.2
1,585,392	+		Synpcc7942_1526	0.13	+0.4
1,585,404	+		Synpcc7942_1526	0.15	-0.9
1,585,427	+		Synpcc7942_1526	0.18	-0.4
1,585,515	+		Synpcc7942_1526	0.29	+0.2
1,585,536	+		Synpcc7942_1526	0.31	+1.2
1,585,536	+		Synpcc7942_1526	0.31	+0.8
1,585,537	-		Synpcc7942_1526	0.32	-1.9
1,585,557	-		Synpcc7942_1526	0.34	+0.8
1,585,564	+		Synpcc7942_1526	0.35	-1.4
1,585,564	+		Synpcc7942_1526	0.35	+1.6
1,585,564	+		Synpcc7942_1526	0.35	+0.3
1,585,572	-		Synpcc7942_1526	0.36	-0.5
1,585,586	+		Synpcc7942_1526	0.38	-0.1
1,585,589	+		Synpcc7942_1526	0.38	+1.2
1,585,596	-		Synpcc7942_1526	0.39	+1.1
1,585,598	+		Synpcc7942_1526	0.39	+6.0
1,585,607	+		Synpcc7942_1526	0.40	+0.2
1,585,671	-		Synpcc7942_1526	0.48	+0.5
1,585,671	-		Synpcc7942_1526	0.48	-1.3
1,585,682	+				-0.4
1,585,686	+		Synpcc7942_1526	0.50	-1.1
1,585,690	-		Synpcc7942_1526	0.51	-0.9
1,585,691	+		Synpcc7942_1526	0.51	+0.2
1,585,697	+		Synpcc7942_1526	0.52	-0.2
1,585,699	-		Synpcc7942_1526	0.52	-0.0
1,585,719	+		Synpcc7942_1526	0.55	-0.8
1,585,757	-		Synpcc7942_1526	0.59	-0.4
1,585,810	+		Synpcc7942_1526	0.66	+2.2
1,585,818	-		Synpcc7942_1526	0.67	+1.4
1,585,835	-		Synpcc7942_1526	0.69	-1.4
1,585,862	-		Synpcc7942_1526	0.73	+0.4
1,585,889	-		Synpcc7942_1526	0.76	+0.8
1,585,949	+		Synpcc7942_1526	0.84	+0.2
1,585,975	-		Synpcc7942_1526	0.87	-1.6
1,585,977	+		Synpcc7942_1526	0.87	-0.2
1,586,004	+				-1.6
1,586,004	+				+0.6
1,586,005	+				-0.4
1,586,013	-				+0.1
1,586,045	-				-0.4
1,586,072	+				-1.3
1,586,072	+				+0.1
1,586,080	-				-0.8
1,586,080	-				-0.6
1,586,080	-				+0.2
1,586,080	-				-0.1
1,586,080	-				-0.4
1,586,080	-				-2.6
1,586,080	-				+0.0
1,586,080	-				+0.6
1,586,080	-				+0.7
1,586,080	-				+0.1
1,586,096	+				-1.4
1,586,096	+				+0.6
1,586,096	+				-0.2
1,586,096	+				+0.6
1,586,096	+				-0.7
1,586,096	+				-1.2
1,586,104	-				+0.3
1,586,104	-				+0.0
1,586,104	-				-0.3
1,586,111	-				-0.9
1,586,118	-				+0.6
1,586,122	+				-0.0
1,586,128	-				-1.0
1,586,153	+				-0.2
1,586,166	+				+0.2
1,586,193	-				-0.7
1,586,227	+				-0.2
1,586,276	-				-0.4
1,586,323	+				+0.1
1,586,325	+				-2.1
1,586,334	+				+1.6
1,586,358	+				-1.6
1,586,366	-				-0.9
1,586,370	-				-0.8
1,586,421	-				+0.2
1,586,434	+				-0.2
1,586,434	+				+0.4
1,586,434	+				-0.3
1,586,434	+				+1.1
1,586,442	-				-0.4
1,586,442	-				+1.6
1,586,442	-				+0.2
1,586,442	-				-0.4
1,586,449	+				-0.1
1,586,451	+				+0.6
1,586,514	+		Synpcc7942_1527	0.11	+1.2
1,586,535	+		Synpcc7942_1527	0.12	+1.6
1,586,540	-		Synpcc7942_1527	0.12	-1.0
1,586,583	+		Synpcc7942_1527	0.14	+0.0
1,586,593	+		Synpcc7942_1527	0.14	-0.1
1,586,596	-		Synpcc7942_1527	0.14	-2.2
1,586,597	-		Synpcc7942_1527	0.14	-2.1
1,586,631	-		Synpcc7942_1527	0.15	+0.2
1,586,641	-		Synpcc7942_1527	0.16	-1.5
1,586,657	-		Synpcc7942_1527	0.16	-0.3
1,586,657	-		Synpcc7942_1527	0.16	+0.0
1,586,659	-		Synpcc7942_1527	0.17	-1.2
1,586,661	+		Synpcc7942_1527	0.17	+2.8
1,586,661	+		Synpcc7942_1527	0.17	-0.3
1,586,692	+		Synpcc7942_1527	0.18	-0.1
1,586,692	+		Synpcc7942_1527	0.18	-0.4
1,586,700	-		Synpcc7942_1527	0.18	+0.5
1,586,700	-		Synpcc7942_1527	0.18	-0.8
1,586,705	-		Synpcc7942_1527	0.18	+0.4
1,586,726	+		Synpcc7942_1527	0.19	-0.6
1,586,729	-		Synpcc7942_1527	0.19	-0.2
1,586,730	+		Synpcc7942_1527	0.19	+0.2
1,586,747	-		Synpcc7942_1527	0.20	-0.0
1,586,751	+		Synpcc7942_1527	0.20	-0.8
1,586,752	-		Synpcc7942_1527	0.20	+1.8
1,586,782	-		Synpcc7942_1527	0.21	-1.2
1,586,782	-		Synpcc7942_1527	0.21	-1.5
1,586,792	+		Synpcc7942_1527	0.22	-0.5
1,586,822	+				+0.2
1,586,827	+		Synpcc7942_1527	0.23	-0.2
1,586,869	+		Synpcc7942_1527	0.25	-0.1
1,586,887	+		Synpcc7942_1527	0.26	-0.1
1,586,914	+		Synpcc7942_1527	0.27	-1.1
1,586,914	+		Synpcc7942_1527	0.27	+0.9
1,586,922	+		Synpcc7942_1527	0.27	-0.8
1,586,922	-		Synpcc7942_1527	0.27	+0.1
1,586,922	-		Synpcc7942_1527	0.27	-1.4
1,586,922	-		Synpcc7942_1527	0.27	+3.2
1,586,948	-		Synpcc7942_1527	0.28	+0.4
1,586,950	+		Synpcc7942_1527	0.28	-1.6
1,586,952	+		Synpcc7942_1527	0.28	+1.5
1,586,960	-				+1.2
1,586,960	-		Synpcc7942_1527	0.28	+0.9
1,586,982	+		Synpcc7942_1527	0.29	-0.6
1,586,982	+		Synpcc7942_1527	0.29	-0.1
1,586,983	-		Synpcc7942_1527	0.29	-0.1
1,586,983	-		Synpcc7942_1527	0.29	-1.0
1,586,990	-		Synpcc7942_1527	0.30	-0.7
1,586,992	+		Synpcc7942_1527	0.30	+0.4
1,587,002	+		Synpcc7942_1527	0.30	+0.2
1,587,010	-		Synpcc7942_1527	0.30	+0.7
1,587,037	+		Synpcc7942_1527	0.32	+0.1
1,587,046	-		Synpcc7942_1527	0.32	-3.1
1,587,056	+		Synpcc7942_1527	0.32	-0.8
1,587,064	-		Synpcc7942_1527	0.33	-1.0