Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1254

Experiment: BG11 with Polymyxin B sulfate 0.0001953125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Polymyxin B sulfate 0.0001953125 mg/ml
1,276,484	+		Synpcc7942_1252	0.73	+0.9
1,276,583	+		Synpcc7942_1252	0.80	-1.3
1,276,593	+		Synpcc7942_1252	0.81	-1.8
1,276,601	-		Synpcc7942_1252	0.82	-0.8
1,276,650	-		Synpcc7942_1252	0.86	+0.2
1,276,652	+		Synpcc7942_1252	0.86	-1.3
1,276,652	+		Synpcc7942_1252	0.86	-2.0
1,276,652	+		Synpcc7942_1252	0.86	-0.1
1,276,652	+		Synpcc7942_1252	0.86	-1.4
1,276,660	-		Synpcc7942_1252	0.86	-2.3
1,276,660	-		Synpcc7942_1252	0.86	-1.5
1,276,660	-		Synpcc7942_1252	0.86	-1.9
1,276,704	+		Synpcc7942_1252	0.90	-0.4
1,276,704	+		Synpcc7942_1252	0.90	-0.6
1,276,706	-				-2.7
1,276,712	-				-1.3
1,276,712	-				-2.2
1,276,712	-				-0.8
1,276,717	-				-0.8
1,276,728	+				-0.4
1,276,728	+				-0.4
1,276,736	-				+0.2
1,276,736	-				+0.0
1,276,741	-				-0.8
1,276,758	-				-1.1
1,276,772	-				-2.9
1,276,788	-				-1.3
1,276,789	-				-1.5
1,276,902	-				-0.6
1,276,974	+		Synpcc7942_1253	0.12	-1.4
1,276,985	+		Synpcc7942_1253	0.16	-2.4
1,277,010	+		Synpcc7942_1253	0.25	-3.3
1,277,010	+		Synpcc7942_1253	0.25	-3.0
1,277,018	-		Synpcc7942_1253	0.28	-3.5
1,277,018	-		Synpcc7942_1253	0.28	-1.4
1,277,023	-		Synpcc7942_1253	0.29	-3.9
1,277,025	+		Synpcc7942_1253	0.30	-2.1
1,277,038	-		Synpcc7942_1253	0.35	-3.6
1,277,065	-		Synpcc7942_1253	0.44	-3.4
1,277,088	+		Synpcc7942_1253	0.52	-2.7
1,277,137	+		Synpcc7942_1253	0.70	-2.6
1,277,145	-		Synpcc7942_1253	0.73	-1.5
1,277,145	-		Synpcc7942_1253	0.73	-2.1
1,277,176	-		Synpcc7942_1253	0.84	-3.0
1,277,181	+		Synpcc7942_1253	0.85	-6.3
1,277,193	-				-4.1
1,277,210	+				-2.9
1,277,215	+				+1.0
1,277,233	+				-1.5
1,277,242	-				-2.0
1,277,242	-				-1.5
1,277,244	+				-1.5
1,277,276	-				+1.2
1,277,297	+				+0.0
1,277,332	-				+0.2
1,277,346	+				-1.1
1,277,354	-				+0.3
1,277,354	-				-0.9
1,277,354	-				+0.1
1,277,354	-				-1.0
1,277,360	-				+0.4
1,277,365	+				-2.0
1,277,366	-				+0.6
1,277,372	-				-1.3
1,277,373	-				-1.4
1,277,374	+				-1.0
1,277,420	-				+0.1
1,277,424	+				+0.8
1,277,441	+				+0.1
1,277,444	+				+0.3
1,277,447	-				+0.7
1,277,452	-				+0.8
1,277,455	+				+0.8
1,277,464	-				-0.3
1,277,467	+				+0.5
1,277,468	+				-1.8
1,277,534	+		Synpcc7942_1254	0.19	+0.8
1,277,552	+		Synpcc7942_1254	0.23	+0.2
1,277,593	+		Synpcc7942_1254	0.34	-1.6
1,277,599	+				+3.2
1,277,599	+				+0.6
1,277,630	+		Synpcc7942_1254	0.43	+0.3
1,277,767	-		Synpcc7942_1254	0.78	+0.9
1,277,850	+				+0.4
1,277,850	+				-0.7
1,277,850	+				-1.8
1,277,858	-				+1.8
1,277,858	-				-1.0
1,277,863	-				-1.8
1,277,890	-				-0.5
1,277,959	+				-0.1
1,278,028	+		Synpcc7942_1255	0.15	-0.8
1,278,095	+		Synpcc7942_1255	0.21	-1.2
1,278,100	+		Synpcc7942_1255	0.21	+1.2
1,278,170	+		Synpcc7942_1255	0.27	-1.0
1,278,170	+		Synpcc7942_1255	0.27	-1.1
1,278,178	-		Synpcc7942_1255	0.28	-0.7
1,278,188	-		Synpcc7942_1255	0.29	+0.5
1,278,248	+		Synpcc7942_1255	0.34	-0.7
1,278,248	+		Synpcc7942_1255	0.34	-0.6
1,278,248	+		Synpcc7942_1255	0.34	-1.4
1,278,248	+		Synpcc7942_1255	0.34	+0.9
1,278,248	+		Synpcc7942_1255	0.34	-3.6
1,278,248	+		Synpcc7942_1255	0.34	+0.2
1,278,256	-		Synpcc7942_1255	0.35	-1.8
1,278,256	-		Synpcc7942_1255	0.35	-1.0
1,278,256	-		Synpcc7942_1255	0.35	-0.0
1,278,268	+		Synpcc7942_1255	0.36	-0.4
1,278,292	+		Synpcc7942_1255	0.38	+0.1
1,278,303	-		Synpcc7942_1255	0.39	-1.3
1,278,319	-		Synpcc7942_1255	0.40	+0.1
1,278,320	+		Synpcc7942_1255	0.40	-1.8
1,278,320	+		Synpcc7942_1255	0.40	-0.4
1,278,323	+		Synpcc7942_1255	0.40	-1.5
1,278,323	+		Synpcc7942_1255	0.40	+0.1
1,278,328	-		Synpcc7942_1255	0.41	-1.1
1,278,331	-		Synpcc7942_1255	0.41	-0.1
1,278,336	-		Synpcc7942_1255	0.42	-0.4
1,278,340	-		Synpcc7942_1255	0.42	+0.3
1,278,347	-		Synpcc7942_1255	0.43	+0.3
1,278,347	-				-0.1
1,278,408	+		Synpcc7942_1255	0.48	+0.2
1,278,426	-		Synpcc7942_1255	0.49	-1.0
1,278,430	+		Synpcc7942_1255	0.50	-0.7
1,278,435	-		Synpcc7942_1255	0.50	+1.0
1,278,440	+		Synpcc7942_1255	0.51	-1.0
1,278,449	-		Synpcc7942_1255	0.51	-0.9
1,278,491	+		Synpcc7942_1255	0.55	+0.4
1,278,491	+		Synpcc7942_1255	0.55	-0.2
1,278,491	+		Synpcc7942_1255	0.55	-0.5
1,278,491	+		Synpcc7942_1255	0.55	-0.1
1,278,499	-		Synpcc7942_1255	0.56	-0.9
1,278,499	-		Synpcc7942_1255	0.56	+0.3
1,278,499	-		Synpcc7942_1255	0.56	-0.2
1,278,499	-		Synpcc7942_1255	0.56	-0.9
1,278,499	-		Synpcc7942_1255	0.56	-0.2
1,278,499	-		Synpcc7942_1255	0.56	-0.4
1,278,519	+		Synpcc7942_1255	0.57	-0.4
1,278,541	+		Synpcc7942_1255	0.59	-2.4
1,278,581	+		Synpcc7942_1255	0.63	-0.8
1,278,620	+		Synpcc7942_1255	0.66	-0.9
1,278,620	+		Synpcc7942_1255	0.66	+0.3
1,278,625	+		Synpcc7942_1255	0.66	+1.0
1,278,638	+		Synpcc7942_1255	0.68	-0.4
1,278,645	+		Synpcc7942_1255	0.68	-0.4
1,278,652	+		Synpcc7942_1255	0.69	-0.7
1,278,653	-		Synpcc7942_1255	0.69	+1.6
1,278,723	+		Synpcc7942_1255	0.75	-0.3
1,278,731	-		Synpcc7942_1255	0.76	-0.4
1,278,733	+		Synpcc7942_1255	0.76	+0.8
1,278,771	+		Synpcc7942_1255	0.79	+0.8
1,278,777	+		Synpcc7942_1255	0.79	+0.8
1,278,783	+		Synpcc7942_1255	0.80	-0.5
1,278,786	-		Synpcc7942_1255	0.80	+0.0
1,278,789	+		Synpcc7942_1255	0.80	-0.5
1,278,795	-		Synpcc7942_1255	0.81	+0.9
1,278,797	-		Synpcc7942_1255	0.81	-0.8
1,278,797	-		Synpcc7942_1255	0.81	-0.4
1,278,812	-		Synpcc7942_1255	0.82	-0.9
1,278,812	-		Synpcc7942_1255	0.82	-2.7
1,278,820	+		Synpcc7942_1255	0.83	+0.5
1,278,825	+		Synpcc7942_1255	0.84	-2.4
1,278,833	-		Synpcc7942_1255	0.84	-0.3
1,278,833	-		Synpcc7942_1255	0.84	-1.4
1,278,842	+		Synpcc7942_1255	0.85	-0.8
1,278,843	+		Synpcc7942_1255	0.85	-1.4