Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS37315

Experiment: Carbon source Deoxyribonucleic from herring sperm 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
3,844,661	+		RR42_RS37310	0.79	+0.1
3,844,661	+		RR42_RS37310	0.79	+0.9
3,844,661	+		RR42_RS37310	0.79	-0.5
3,844,661	+		RR42_RS37310	0.79	-0.3
3,844,661	+		RR42_RS37310	0.79	-2.1
3,844,662	-		RR42_RS37310	0.79	-1.5
3,844,662	-		RR42_RS37310	0.79	-2.3
3,844,662	-		RR42_RS37310	0.79	+1.0
3,844,663	+		RR42_RS37310	0.79	+0.1
3,844,663	+		RR42_RS37310	0.79	+0.8
3,844,663	+		RR42_RS37310	0.79	-0.3
3,844,664	-		RR42_RS37310	0.79	-0.1
3,844,664	-		RR42_RS37310	0.79	+0.6
3,844,664	-		RR42_RS37310	0.79	+0.2
3,844,664	-		RR42_RS37310	0.79	+0.7
3,844,670	-		RR42_RS37310	0.79	+0.3
3,844,726	+		RR42_RS37310	0.81	-1.2
3,844,726	+		RR42_RS37310	0.81	+0.5
3,844,738	+		RR42_RS37310	0.81	+0.5
3,844,738	+		RR42_RS37310	0.81	+0.2
3,844,738	+		RR42_RS37310	0.81	-1.4
3,844,739	-		RR42_RS37310	0.81	+1.3
3,844,915	+		RR42_RS37310	0.87	+0.4
3,844,915	+		RR42_RS37310	0.87	-2.9
3,844,915	+		RR42_RS37310	0.87	-0.3
3,844,916	-		RR42_RS37310	0.87	+0.5
3,844,916	-		RR42_RS37310	0.87	-0.7
3,844,916	-		RR42_RS37310	0.87	-0.2
3,844,916	-		RR42_RS37310	0.87	-0.2
3,844,931	-		RR42_RS37310	0.87	-0.2
3,844,931	-		RR42_RS37310	0.87	+0.0
3,845,084	-				+0.9
3,845,084	-				-2.3
3,845,089	+				-0.1
3,845,090	-				-0.1
3,845,090	-				-0.3
3,845,090	-				-1.5
3,845,249	+				-0.3
3,845,249	+				+0.6
3,845,249	+				-0.7
3,845,249	+				-0.1
3,845,249	+				-1.8
3,845,249	+				-0.2
3,845,249	+				+0.4
3,845,249	+				+0.8
3,845,250	-				+0.6
3,845,250	-				-2.3
3,845,250	-				-1.3
3,845,250	-				-0.1
3,845,407	+				+0.1
3,845,408	-				+1.3
3,845,408	-				-1.4
3,845,408	-				+0.4
3,845,408	-				-0.2
3,845,408	-				-0.3
3,845,409	+				+0.0
3,845,409	+				-0.3
3,845,410	-				+0.7
3,845,451	+				-1.7
3,845,456	+				+0.3
3,845,457	-				+0.4
3,845,457	-				-0.7
3,845,457	-				-1.0
3,845,528	+				+1.3
3,845,674	+				+1.7
3,845,674	+				-0.7
3,845,726	+				-0.7
3,845,726	+				+1.1
3,845,726	+				-0.1
3,845,727	-				-0.2
3,845,727	-				+2.1
3,845,727	-				+0.4
3,845,729	+				+0.0
3,845,730	-				+0.9
3,845,730	-				-0.7
3,846,012	-		RR42_RS37315	0.20	+0.3
3,846,071	-		RR42_RS37315	0.23	+0.3
3,846,218	+		RR42_RS37315	0.30	-0.3
3,846,218	+		RR42_RS37315	0.30	-2.8
3,846,218	+		RR42_RS37315	0.30	-0.5
3,846,219	-		RR42_RS37315	0.30	+0.5
3,846,251	+		RR42_RS37315	0.32	-3.3
3,846,251	+		RR42_RS37315	0.32	+0.9
3,846,251	+		RR42_RS37315	0.32	+1.3
3,846,252	-		RR42_RS37315	0.32	+0.2
3,846,252	-		RR42_RS37315	0.32	-0.1
3,846,377	+		RR42_RS37315	0.38	-2.7
3,846,378	-		RR42_RS37315	0.38	+1.3
3,846,564	+		RR42_RS37315	0.48	-0.1
3,846,564	+		RR42_RS37315	0.48	-2.0
3,846,565	-		RR42_RS37315	0.48	-0.7
3,846,727	+		RR42_RS37315	0.56	+1.9
3,846,752	-		RR42_RS37315	0.57	-1.0
3,846,770	+		RR42_RS37315	0.58	+0.6
3,846,770	+		RR42_RS37315	0.58	+0.3
3,846,770	+		RR42_RS37315	0.58	+0.8
3,846,771	-		RR42_RS37315	0.58	-2.4
3,846,771	-		RR42_RS37315	0.58	+1.1
3,846,782	-		RR42_RS37315	0.59	+0.3
3,846,791	+		RR42_RS37315	0.59	-0.3
3,846,791	+		RR42_RS37315	0.59	+0.4
3,846,811	+		RR42_RS37315	0.60	-0.8
3,846,812	-		RR42_RS37315	0.61	+0.5
3,846,812	-		RR42_RS37315	0.61	-2.1
3,846,866	+		RR42_RS37315	0.63	-0.4
3,846,948	-		RR42_RS37315	0.67	-0.9
3,847,181	+		RR42_RS37315	0.79	+0.3
3,847,181	+		RR42_RS37315	0.79	+0.0
3,847,330	-		RR42_RS37315	0.87	+0.2
3,847,343	-		RR42_RS37315	0.88	+0.2
3,847,460	+				-0.2
3,847,460	+				+0.8
3,847,460	+				-2.1
3,847,460	+				-0.7
3,847,460	+				-0.4
3,847,460	+				-2.5
3,847,460	+				-0.2
3,847,461	-				+0.8
3,847,518	-				-0.1
3,847,585	+				-1.3
3,847,585	+				+0.3
3,847,585	+				-0.1
3,847,586	-				+0.7
3,847,603	+				-1.3
3,847,603	+				-0.6
3,847,603	+				+1.1
3,847,603	+				+0.3
3,847,603	+				+1.2
3,847,604	-				+0.3
3,847,604	-				-0.8
3,847,604	-				+0.6
3,847,604	-				+2.2
3,847,649	-		RR42_RS37320	0.14	+0.5
3,847,729	-		RR42_RS37320	0.38	+0.5
3,848,082	-				+0.7
3,848,082	-				-0.4
3,848,082	-				-0.7
3,848,091	-				-0.3
3,848,102	+				+0.4
3,848,103	-				+0.3
3,848,103	-				-0.1
3,848,174	+				+0.2
3,848,174	+				+0.3
3,848,175	-				-0.4
3,848,229	-				+0.9
3,848,235	+				-1.7
3,848,235	+				+0.2
3,848,235	+				-1.5
3,848,276	+				+0.1
3,848,330	+				-0.8
3,848,384	+				-0.0
3,848,384	+				-1.2
3,848,384	+				-0.7
3,848,384	+				-0.1
3,848,385	-				+0.1
3,848,385	-				+0.2
3,848,385	-				-0.5
3,848,385	-				+1.6
3,848,402	+				-0.3
3,848,403	-				+2.3
3,848,403	-				-0.5
3,848,426	+				-0.3
3,848,427	-				-0.2
3,848,510	+		RR42_RS37325	0.12	+0.3
3,848,510	+		RR42_RS37325	0.12	-0.3
3,848,510	+		RR42_RS37325	0.12	-1.0
3,848,511	-		RR42_RS37325	0.12	+0.9
3,848,573	+				+0.3
3,848,582	+		RR42_RS37325	0.13	-0.6