Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36685
Experiment: Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source Deoxyribonucleic from herring sperm 10 mg/mL |
---|---|---|---|---|---|
remove | |||||
3,685,964 | - | RR42_RS36680 | 0.33 | +0.8 | |
3,685,964 | - | RR42_RS36680 | 0.33 | -0.3 | |
3,685,964 | - | RR42_RS36680 | 0.33 | -0.2 | |
3,686,236 | + | RR42_RS36680 | 0.58 | +0.3 | |
3,686,444 | - | RR42_RS36680 | 0.78 | -1.5 | |
3,686,509 | + | RR42_RS36680 | 0.84 | +0.9 | |
3,686,518 | + | RR42_RS36680 | 0.84 | +0.5 | |
3,686,931 | + | RR42_RS36685 | 0.42 | -0.1 | |
3,686,931 | + | RR42_RS36685 | 0.42 | -0.5 | |
3,686,931 | + | RR42_RS36685 | 0.42 | +0.0 | |
3,686,931 | + | RR42_RS36685 | 0.42 | +3.6 | |
3,686,932 | - | RR42_RS36685 | 0.42 | -0.5 | |
3,687,170 | + | RR42_RS36685 | 0.89 | +0.7 | |
3,687,171 | - | RR42_RS36685 | 0.89 | +1.3 | |
3,687,171 | - | RR42_RS36685 | 0.89 | +0.6 | |
3,687,865 | - | RR42_RS36690 | 0.81 | -0.3 | |
3,687,868 | + | RR42_RS36690 | 0.82 | -1.4 | |
3,687,868 | + | RR42_RS36690 | 0.82 | -2.4 | |
3,687,868 | + | RR42_RS36690 | 0.82 | +0.5 | |
3,687,868 | + | RR42_RS36690 | 0.82 | -0.8 | |
3,687,868 | + | RR42_RS36690 | 0.82 | +0.3 | |
3,687,869 | - | RR42_RS36690 | 0.82 | +1.4 | |
3,687,869 | - | RR42_RS36690 | 0.82 | +1.0 | |
3,688,186 | + | -0.3 |
Or see this region's nucleotide sequence