Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36125

Experiment: Carbon source Deoxyribonucleic from herring sperm 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
3,552,270	+		RR42_RS36120	0.21	+0.9
3,552,271	-		RR42_RS36120	0.21	+0.6
3,552,513	+		RR42_RS36120	0.47	+0.7
3,552,513	+		RR42_RS36120	0.47	-0.2
3,552,514	-		RR42_RS36120	0.47	+0.3
3,552,514	-		RR42_RS36120	0.47	+1.3
3,552,514	-		RR42_RS36120	0.47	-2.5
3,552,696	+		RR42_RS36120	0.67	-0.3
3,552,798	+		RR42_RS36120	0.78	-0.9
3,553,011	+				+1.3
3,553,021	-				-1.2
3,553,021	-				-0.4
3,553,021	-				-1.0
3,553,021	-				-1.2
3,553,027	+				+0.3
3,553,027	+				+1.3
3,553,027	+				-0.3
3,553,028	-				+0.1
3,553,028	-				-1.5
3,553,028	-				+0.3
3,553,028	-				-4.1
3,553,028	-				+0.4
3,553,051	-				-0.4
3,553,097	-				-0.3
3,553,120	-				-0.1
3,553,240	+		RR42_RS36125	0.11	+0.3
3,553,240	+		RR42_RS36125	0.11	+1.0
3,553,244	+		RR42_RS36125	0.12	+0.2
3,553,244	+		RR42_RS36125	0.12	-1.5
3,553,244	+		RR42_RS36125	0.12	-2.3
3,553,244	+		RR42_RS36125	0.12	-0.2
3,553,244	+		RR42_RS36125	0.12	+1.1
3,553,244	+		RR42_RS36125	0.12	-0.7
3,553,244	+		RR42_RS36125	0.12	-0.4
3,553,244	+		RR42_RS36125	0.12	-0.3
3,553,244	+		RR42_RS36125	0.12	-1.4
3,553,245	-		RR42_RS36125	0.12	+1.0
3,553,245	-		RR42_RS36125	0.12	-0.4
3,553,245	-		RR42_RS36125	0.12	-2.0
3,553,245	-		RR42_RS36125	0.12	+0.3
3,553,245	-		RR42_RS36125	0.12	-2.4
3,553,245	-		RR42_RS36125	0.12	-0.7
3,553,245	-		RR42_RS36125	0.12	-1.0
3,553,391	+		RR42_RS36125	0.29	-2.0
3,553,392	-		RR42_RS36125	0.29	-0.4
3,553,392	-		RR42_RS36125	0.29	-1.0
3,553,537	-		RR42_RS36125	0.46	+0.8
3,553,565	+		RR42_RS36125	0.49	+1.1
3,553,565	+		RR42_RS36125	0.49	+0.5
3,553,566	-		RR42_RS36125	0.50	-0.8
3,553,634	+		RR42_RS36125	0.58	+1.5
3,553,634	+		RR42_RS36125	0.58	-0.1
3,553,634	+		RR42_RS36125	0.58	-0.7
3,553,635	-		RR42_RS36125	0.58	-0.3
3,553,723	+		RR42_RS36125	0.68	-1.5
3,553,882	+		RR42_RS36125	0.87	+0.6
3,553,883	-		RR42_RS36125	0.87	-0.7
3,553,883	-		RR42_RS36125	0.87	-1.3
3,554,098	+		RR42_RS36130	0.11	+2.8
3,554,099	-		RR42_RS36130	0.11	+1.8
3,554,393	-		RR42_RS36130	0.45	+3.2
3,554,428	+		RR42_RS36130	0.50	+1.8
3,554,428	+		RR42_RS36130	0.50	+1.1
3,554,429	-		RR42_RS36130	0.50	+1.9
3,554,560	+		RR42_RS36130	0.65	+1.8
3,554,561	-		RR42_RS36130	0.65	+3.5
3,554,631	+		RR42_RS36130	0.73	+1.6
3,554,631	+		RR42_RS36130	0.73	+2.1
3,554,632	-		RR42_RS36130	0.74	+2.0
3,554,644	+		RR42_RS36130	0.75	+1.2
3,554,644	+		RR42_RS36130	0.75	+1.4
3,554,644	+		RR42_RS36130	0.75	+1.7
3,554,645	-		RR42_RS36130	0.75	+1.3
3,554,738	+		RR42_RS36130	0.86	+2.5
3,554,738	+		RR42_RS36130	0.86	+1.3
3,554,738	+		RR42_RS36130	0.86	+1.2
3,554,739	-		RR42_RS36130	0.86	+2.0
3,554,739	-		RR42_RS36130	0.86	+1.6
3,554,740	+		RR42_RS36130	0.86	+1.4
3,554,740	+		RR42_RS36130	0.86	+2.1
3,554,740	-		RR42_RS36130	0.86	+1.6
3,554,741	-		RR42_RS36130	0.86	+0.8
3,554,741	-		RR42_RS36130	0.86	+2.1
3,554,741	-		RR42_RS36130	0.86	+2.8