Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35640

Experiment: Carbon source Deoxyribonucleic from herring sperm 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
3,447,685	-				+0.1
3,447,685	-				+0.2
3,447,685	-				-0.0
3,447,694	+				-0.6
3,447,713	+				-2.0
3,447,713	+				-2.2
3,447,850	+		RR42_RS35630	0.29	-0.3
3,447,851	-		RR42_RS35630	0.29	-2.7
3,447,851	-		RR42_RS35630	0.29	+0.9
3,447,876	+		RR42_RS35630	0.33	+1.7
3,447,876	+		RR42_RS35630	0.33	+0.2
3,447,877	-		RR42_RS35630	0.33	-1.3
3,447,877	-		RR42_RS35630	0.33	-0.7
3,447,877	-		RR42_RS35630	0.33	+2.6
3,447,877	-		RR42_RS35630	0.33	-0.3
3,447,877	-		RR42_RS35630	0.33	+0.2
3,447,917	-		RR42_RS35630	0.39	+0.2
3,448,054	+		RR42_RS35630	0.60	-3.9
3,448,055	-		RR42_RS35630	0.60	-0.6
3,448,055	-		RR42_RS35630	0.60	-1.7
3,448,057	+		RR42_RS35630	0.61	+2.3
3,448,136	+		RR42_RS35630	0.73	-2.6
3,448,136	+		RR42_RS35630	0.73	-0.9
3,448,136	+		RR42_RS35630	0.73	-2.3
3,448,183	-		RR42_RS35630	0.80	+0.4
3,448,183	-		RR42_RS35630	0.80	+0.8
3,448,311	+				-3.2
3,448,311	+				-0.1
3,448,311	+				-1.7
3,448,311	+				-1.3
3,448,311	+				-3.1
3,448,312	-				-1.0
3,448,312	-				-0.3
3,448,354	+				-1.1
3,448,368	+		RR42_RS35635	0.13	-1.7
3,448,368	+		RR42_RS35635	0.13	+1.3
3,448,368	+		RR42_RS35635	0.13	-0.4
3,448,369	-		RR42_RS35635	0.14	+0.9
3,448,372	+		RR42_RS35635	0.15	-0.3
3,448,372	+		RR42_RS35635	0.15	-0.2
3,448,373	-		RR42_RS35635	0.15	+0.2
3,448,400	+		RR42_RS35635	0.23	-1.2
3,448,400	+		RR42_RS35635	0.23	-0.7
3,448,492	+		RR42_RS35635	0.49	-2.6
3,448,492	+		RR42_RS35635	0.49	-3.3
3,448,493	-		RR42_RS35635	0.49	+0.8
3,448,493	-		RR42_RS35635	0.49	+0.3
3,448,493	-		RR42_RS35635	0.49	+0.5
3,448,493	-		RR42_RS35635	0.49	-0.3
3,448,594	-		RR42_RS35635	0.78	+0.2
3,448,594	-		RR42_RS35635	0.78	+0.4
3,448,594	-		RR42_RS35635	0.78	+1.0
3,448,594	-		RR42_RS35635	0.78	-0.8
3,448,868	+		RR42_RS35640	0.24	-0.6
3,448,868	+		RR42_RS35640	0.24	-0.4
3,448,910	+		RR42_RS35640	0.30	-1.0
3,448,911	-		RR42_RS35640	0.30	+0.1
3,448,913	+		RR42_RS35640	0.30	-0.5
3,448,914	-		RR42_RS35640	0.30	-0.8
3,449,026	+		RR42_RS35640	0.45	-1.7
3,449,027	-		RR42_RS35640	0.45	+0.0
3,449,027	-		RR42_RS35640	0.45	-1.8
3,449,027	-		RR42_RS35640	0.45	-1.1
3,449,052	+		RR42_RS35640	0.49	-0.5
3,449,052	+		RR42_RS35640	0.49	-0.5
3,449,053	-		RR42_RS35640	0.49	+0.4
3,449,053	-		RR42_RS35640	0.49	+0.7
3,449,053	-		RR42_RS35640	0.49	-0.8
3,449,172	-		RR42_RS35640	0.64	-0.8
3,449,316	+		RR42_RS35640	0.83	-0.3
3,449,317	-		RR42_RS35640	0.84	+0.5
3,449,317	-		RR42_RS35640	0.84	+0.3
3,449,317	-		RR42_RS35640	0.84	+0.2
3,449,532	+				+0.3
3,449,533	-				+1.3
3,449,533	-				+0.1
3,449,549	+				-0.7
3,449,676	+		RR42_RS35645	0.19	+0.7
3,449,676	+		RR42_RS35645	0.19	-1.3
3,449,677	-		RR42_RS35645	0.19	+0.9
3,449,741	-		RR42_RS35645	0.24	-0.1
3,449,772	-		RR42_RS35645	0.26	-0.2
3,449,864	+		RR42_RS35645	0.33	-0.2
3,449,865	-		RR42_RS35645	0.33	-0.1
3,449,893	+		RR42_RS35645	0.35	-1.8
3,449,966	+		RR42_RS35645	0.41	-2.0
3,449,967	-		RR42_RS35645	0.41	+1.1
3,449,967	-		RR42_RS35645	0.41	+1.4
3,450,014	+		RR42_RS35645	0.45	-2.9
3,450,089	+		RR42_RS35645	0.51	-0.4
3,450,090	-		RR42_RS35645	0.51	-0.4
3,450,244	+		RR42_RS35645	0.62	-0.7
3,450,244	+		RR42_RS35645	0.62	-0.1
3,450,244	+		RR42_RS35645	0.62	+0.9
3,450,299	-		RR42_RS35645	0.67	+2.6
3,450,414	-		RR42_RS35645	0.75	-0.6