Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35125

Experiment: Carbon source Deoxyribonucleic from herring sperm 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
3,330,886	+		RR42_RS35120	0.41	-0.2
3,330,886	+		RR42_RS35120	0.41	+0.1
3,330,887	-		RR42_RS35120	0.41	-0.8
3,330,887	-		RR42_RS35120	0.41	-0.8
3,330,887	-		RR42_RS35120	0.41	-0.1
3,330,888	+		RR42_RS35120	0.41	-0.8
3,330,889	-		RR42_RS35120	0.41	+0.5
3,330,958	+		RR42_RS35120	0.46	-2.6
3,330,958	+		RR42_RS35120	0.46	-0.5
3,330,958	+		RR42_RS35120	0.46	-1.6
3,330,958	+		RR42_RS35120	0.46	-0.8
3,331,115	-		RR42_RS35120	0.59	+0.0
3,331,115	-		RR42_RS35120	0.59	-0.5
3,331,206	+		RR42_RS35120	0.66	-0.0
3,331,206	+		RR42_RS35120	0.66	-0.6
3,331,206	+		RR42_RS35120	0.66	-0.1
3,331,216	+		RR42_RS35120	0.66	+2.3
3,331,216	+		RR42_RS35120	0.66	-0.7
3,331,216	+		RR42_RS35120	0.66	-0.2
3,331,217	-		RR42_RS35120	0.67	+0.2
3,331,217	-		RR42_RS35120	0.67	-0.4
3,331,217	-		RR42_RS35120	0.67	+0.3
3,331,218	+		RR42_RS35120	0.67	-2.6
3,331,218	+		RR42_RS35120	0.67	-0.1
3,331,219	-		RR42_RS35120	0.67	-0.1
3,331,524	+				-0.1
3,331,524	+				+1.1
3,331,524	+				-0.8
3,331,524	+				-0.3
3,331,524	+				-2.2
3,331,524	+				+1.0
3,331,780	+				-1.6
3,331,883	-				-1.8
3,332,095	+		RR42_RS35125	0.23	-3.2
3,332,182	+		RR42_RS35125	0.29	-1.0
3,332,182	+		RR42_RS35125	0.29	-0.9
3,332,183	-		RR42_RS35125	0.29	-0.6
3,332,312	-		RR42_RS35125	0.38	-0.9
3,332,563	+		RR42_RS35125	0.56	+0.8
3,332,563	+		RR42_RS35125	0.56	+0.4
3,332,564	-		RR42_RS35125	0.56	-0.3
3,332,695	+		RR42_RS35125	0.65	+0.3
3,332,695	+		RR42_RS35125	0.65	+0.2
3,332,696	-		RR42_RS35125	0.65	-0.0
3,332,711	-		RR42_RS35125	0.66	-2.8
3,332,773	+		RR42_RS35125	0.71	-2.1
3,332,773	+		RR42_RS35125	0.71	-1.1
3,332,773	+		RR42_RS35125	0.71	-0.2
3,332,773	+		RR42_RS35125	0.71	+0.5
3,333,040	+		RR42_RS35125	0.89	+0.2
3,333,041	-		RR42_RS35125	0.89	-0.4
3,333,094	+				+1.2
3,333,127	-				-0.8
3,333,156	-				+0.5
3,333,175	+				+1.0
3,333,342	+				-1.3
3,333,343	-				+1.0
3,333,343	-				-0.3
3,333,649	-		RR42_RS35130	0.21	+0.0
3,333,690	+		RR42_RS35130	0.24	+1.5
3,334,170	+		RR42_RS35130	0.53	-0.4
3,334,170	+		RR42_RS35130	0.53	+0.1
3,334,170	+		RR42_RS35130	0.53	-1.8
3,334,170	+		RR42_RS35130	0.53	+0.4
3,334,170	+		RR42_RS35130	0.53	+0.7
3,334,170	+		RR42_RS35130	0.53	-0.1
3,334,170	+		RR42_RS35130	0.53	-0.1
3,334,171	-		RR42_RS35130	0.53	-2.3
3,334,171	-		RR42_RS35130	0.53	+0.4
3,334,171	-		RR42_RS35130	0.53	+0.2
3,334,171	-		RR42_RS35130	0.53	-0.3
3,334,176	+		RR42_RS35130	0.53	+0.3
3,334,176	+		RR42_RS35130	0.53	+1.1
3,334,176	+		RR42_RS35130	0.53	+1.6
3,334,177	-		RR42_RS35130	0.53	+0.8