Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34165

Experiment: Carbon source Deoxyribonucleic from herring sperm 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
3,089,884	+				+0.3
3,089,884	+				-0.2
3,089,884	+				+2.0
3,089,884	+				+1.4
3,089,884	+				-0.7
3,089,885	-				+0.9
3,090,026	-		RR42_RS34160	0.19	-1.9
3,090,026	-		RR42_RS34160	0.19	+1.0
3,090,205	-		RR42_RS34160	0.43	-0.9
3,090,205	-		RR42_RS34160	0.43	+0.9
3,090,205	-		RR42_RS34160	0.43	+0.4
3,090,205	-		RR42_RS34160	0.43	-0.4
3,090,261	+		RR42_RS34160	0.51	-0.3
3,090,261	+		RR42_RS34160	0.51	-0.9
3,090,323	-		RR42_RS34160	0.59	+1.6
3,090,386	+		RR42_RS34160	0.68	+0.3
3,090,386	+		RR42_RS34160	0.68	-0.6
3,090,386	+		RR42_RS34160	0.68	+0.4
3,090,658	+				-1.0
3,090,658	+				+0.6
3,090,658	+				-0.8
3,090,659	-				-0.7
3,090,659	-				+1.4
3,090,660	+				-0.2
3,090,660	+				-2.3
3,090,660	+				+0.2
3,090,660	+				-0.5
3,090,660	+				-0.8
3,090,661	-				+0.0
3,090,663	-				-0.0
3,090,663	-				-1.5
3,090,697	+				-0.2
3,090,743	-				-0.6
3,090,769	-				-0.7
3,090,769	-				-1.6
3,090,863	+		RR42_RS34165	0.11	+0.5
3,090,864	-		RR42_RS34165	0.11	+0.8
3,090,891	+		RR42_RS34165	0.14	-1.4
3,090,904	+		RR42_RS34165	0.15	-0.4
3,090,905	-		RR42_RS34165	0.15	-0.8
3,091,020	+		RR42_RS34165	0.27	-2.4
3,091,084	+		RR42_RS34165	0.34	+1.1
3,091,084	+		RR42_RS34165	0.34	+1.2
3,091,084	+		RR42_RS34165	0.34	-0.4
3,091,084	+		RR42_RS34165	0.34	+1.3
3,091,222	+		RR42_RS34165	0.48	-0.6
3,091,222	+		RR42_RS34165	0.48	+0.2
3,091,243	+		RR42_RS34165	0.50	-0.3
3,091,244	-		RR42_RS34165	0.50	-0.2
3,091,303	+		RR42_RS34165	0.56	-2.8
3,091,303	+		RR42_RS34165	0.56	+0.9
3,091,303	+		RR42_RS34165	0.56	-1.1
3,091,303	+		RR42_RS34165	0.56	+1.0
3,091,304	-		RR42_RS34165	0.56	-0.5
3,091,304	-		RR42_RS34165	0.56	+1.2
3,091,304	-		RR42_RS34165	0.56	-0.2
3,091,489	+		RR42_RS34165	0.76	-0.9
3,091,489	+		RR42_RS34165	0.76	-0.8
3,091,489	+		RR42_RS34165	0.76	+0.5
3,091,492	+		RR42_RS34165	0.76	+0.3
3,091,492	+		RR42_RS34165	0.76	+0.3
3,091,492	+		RR42_RS34165	0.76	-0.1
3,091,492	+		RR42_RS34165	0.76	+0.6
3,091,493	-		RR42_RS34165	0.76	-1.3
3,091,493	-		RR42_RS34165	0.76	+1.1
3,091,493	-		RR42_RS34165	0.76	+1.8
3,091,493	-		RR42_RS34165	0.76	-2.5
3,091,493	-		RR42_RS34165	0.76	+1.2
3,091,530	+		RR42_RS34165	0.80	+0.1
3,091,580	-		RR42_RS34165	0.85	+0.9
3,091,580	-		RR42_RS34165	0.85	+1.7
3,091,733	-				-0.6
3,091,733	-				-0.6
3,091,733	-				-1.0
3,091,804	+				+1.4
3,091,951	+		RR42_RS34170	0.16	-0.1
3,091,952	-		RR42_RS34170	0.16	+0.2
3,092,291	+		RR42_RS34170	0.44	-1.8
3,092,292	-		RR42_RS34170	0.44	+2.6
3,092,375	+		RR42_RS34170	0.51	+0.4
3,092,376	-		RR42_RS34170	0.51	+0.8
3,092,376	-		RR42_RS34170	0.51	+0.0
3,092,376	-		RR42_RS34170	0.51	-0.6
3,092,406	-		RR42_RS34170	0.54	+0.2
3,092,408	+		RR42_RS34170	0.54	+0.0
3,092,471	+		RR42_RS34170	0.59	+0.2
3,092,498	+		RR42_RS34170	0.61	+1.4
3,092,509	+		RR42_RS34170	0.62	-0.3
3,092,716	-		RR42_RS34170	0.80	-1.1