Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33560

Experiment: Carbon source Deoxyribonucleic from herring sperm 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
2,944,780	+				-0.3
2,945,275	+		RR42_RS33555	0.47	+0.1
2,945,275	+		RR42_RS33555	0.47	-1.3
2,945,276	-		RR42_RS33555	0.47	+0.1
2,945,276	-		RR42_RS33555	0.47	-0.4
2,945,276	-		RR42_RS33555	0.47	-0.1
2,945,276	-		RR42_RS33555	0.47	-2.6
2,945,276	-		RR42_RS33555	0.47	+0.0
2,945,277	+		RR42_RS33555	0.47	+0.2
2,945,277	+		RR42_RS33555	0.47	+0.7
2,945,278	-		RR42_RS33555	0.47	+0.6
2,945,278	-		RR42_RS33555	0.47	+0.6
2,945,711	+				+1.4
2,945,772	+				+0.9
2,945,773	-				-1.7
2,945,773	-				-0.8
2,945,773	-				+0.9
2,945,773	-				-0.3
2,945,848	-				-1.3
2,945,935	-		RR42_RS33560	0.11	+0.7
2,946,023	-		RR42_RS33560	0.17	-1.3
2,946,084	+		RR42_RS33560	0.21	+0.6
2,946,093	+		RR42_RS33560	0.21	+0.9
2,946,093	+		RR42_RS33560	0.21	+1.1
2,946,093	+		RR42_RS33560	0.21	-1.5
2,946,094	-		RR42_RS33560	0.21	+0.4
2,946,094	-		RR42_RS33560	0.21	+0.3
2,946,094	-		RR42_RS33560	0.21	-0.5
2,946,103	-		RR42_RS33560	0.22	-0.4
2,946,168	+		RR42_RS33560	0.26	-0.4
2,946,168	+		RR42_RS33560	0.26	-1.2
2,946,369	+		RR42_RS33560	0.40	-0.2
2,946,437	+		RR42_RS33560	0.44	+0.0
2,946,477	+		RR42_RS33560	0.47	-0.8
2,946,477	+		RR42_RS33560	0.47	+0.1
2,946,478	-		RR42_RS33560	0.47	+0.6
2,946,588	+		RR42_RS33560	0.54	+0.5
2,946,589	-		RR42_RS33560	0.54	+0.0
2,946,589	-		RR42_RS33560	0.54	-0.6
2,946,720	+		RR42_RS33560	0.63	+1.6
2,946,813	+		RR42_RS33560	0.69	-1.3
2,946,813	+		RR42_RS33560	0.69	-0.4
2,946,813	+		RR42_RS33560	0.69	+0.1
2,946,814	-		RR42_RS33560	0.69	+0.9
2,946,817	-		RR42_RS33560	0.69	-0.1
2,946,817	-		RR42_RS33560	0.69	-1.0
2,946,865	+		RR42_RS33560	0.72	-1.4
2,946,866	-		RR42_RS33560	0.73	+1.2
2,946,866	-		RR42_RS33560	0.73	+0.7
2,946,867	+		RR42_RS33560	0.73	-0.0
2,946,867	+		RR42_RS33560	0.73	+0.2
2,946,868	-		RR42_RS33560	0.73	-1.4
2,946,868	-		RR42_RS33560	0.73	+0.2
2,947,068	+		RR42_RS33560	0.86	-1.3
2,947,068	+		RR42_RS33560	0.86	+0.3
2,947,069	-		RR42_RS33560	0.86	-0.3
2,947,103	-		RR42_RS33560	0.88	-1.1
2,947,279	+				-1.5
2,947,280	-				-1.3
2,947,324	+				-0.5
2,947,324	+				+0.0
2,947,326	+				+0.6
2,947,327	-				+0.1
2,947,327	-				+0.5
2,947,357	+				-1.7
2,947,630	-				-0.0
2,947,978	+				+0.1
2,947,978	+				-0.2
2,947,978	+				+0.1
2,947,979	-				-0.9
2,947,979	-				-2.1
2,947,979	-				-0.5
2,948,221	+		RR42_RS33565	0.12	-1.3
2,948,222	-		RR42_RS33565	0.12	-1.6