Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33555

Experiment: Carbon source Deoxyribonucleic from herring sperm 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
2,944,018	+		RR42_RS33550	0.34	-0.8
2,944,117	+		RR42_RS33550	0.41	+1.1
2,944,118	-		RR42_RS33550	0.42	-1.5
2,944,138	+		RR42_RS33550	0.43	-1.9
2,944,234	+		RR42_RS33550	0.50	+0.3
2,944,234	+		RR42_RS33550	0.50	-0.7
2,944,235	-		RR42_RS33550	0.50	+0.3
2,944,235	-		RR42_RS33550	0.50	+0.7
2,944,235	-		RR42_RS33550	0.50	-0.5
2,944,235	-		RR42_RS33550	0.50	+0.5
2,944,728	+		RR42_RS33550	0.88	-1.8
2,944,780	+				-0.3
2,945,275	+		RR42_RS33555	0.47	+0.1
2,945,275	+		RR42_RS33555	0.47	-1.3
2,945,276	-		RR42_RS33555	0.47	+0.1
2,945,276	-		RR42_RS33555	0.47	-0.4
2,945,276	-		RR42_RS33555	0.47	-0.1
2,945,276	-		RR42_RS33555	0.47	-2.6
2,945,276	-		RR42_RS33555	0.47	+0.0
2,945,277	+		RR42_RS33555	0.47	+0.2
2,945,277	+		RR42_RS33555	0.47	+0.7
2,945,278	-		RR42_RS33555	0.47	+0.6
2,945,278	-		RR42_RS33555	0.47	+0.6
2,945,711	+				+1.4
2,945,772	+				+0.9
2,945,773	-				-1.7
2,945,773	-				-0.8
2,945,773	-				+0.9
2,945,773	-				-0.3
2,945,848	-				-1.3
2,945,935	-		RR42_RS33560	0.11	+0.7
2,946,023	-		RR42_RS33560	0.17	-1.3
2,946,084	+		RR42_RS33560	0.21	+0.6
2,946,093	+		RR42_RS33560	0.21	+0.9
2,946,093	+		RR42_RS33560	0.21	+1.1
2,946,093	+		RR42_RS33560	0.21	-1.5
2,946,094	-		RR42_RS33560	0.21	+0.4
2,946,094	-		RR42_RS33560	0.21	+0.3
2,946,094	-		RR42_RS33560	0.21	-0.5
2,946,103	-		RR42_RS33560	0.22	-0.4
2,946,168	+		RR42_RS33560	0.26	-0.4
2,946,168	+		RR42_RS33560	0.26	-1.2
2,946,369	+		RR42_RS33560	0.40	-0.2
2,946,437	+		RR42_RS33560	0.44	+0.0
2,946,477	+		RR42_RS33560	0.47	-0.8
2,946,477	+		RR42_RS33560	0.47	+0.1
2,946,478	-		RR42_RS33560	0.47	+0.6
2,946,588	+		RR42_RS33560	0.54	+0.5
2,946,589	-		RR42_RS33560	0.54	+0.0
2,946,589	-		RR42_RS33560	0.54	-0.6