Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS29370

Experiment: Carbon source Deoxyribonucleic from herring sperm 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
1,939,579	-		RR42_RS29360	0.36	+0.9
1,939,596	+		RR42_RS29360	0.40	+0.2
1,939,604	+		RR42_RS29360	0.41	-0.3
1,939,604	+		RR42_RS29360	0.41	+0.2
1,939,768	+		RR42_RS29360	0.75	+0.2
1,939,769	-		RR42_RS29360	0.75	+0.1
1,939,769	-		RR42_RS29360	0.75	-2.2
1,939,829	+		RR42_RS29360	0.88	+1.1
1,939,830	-		RR42_RS29360	0.88	-1.1
1,939,902	-				-0.1
1,939,926	+				+0.3
1,940,009	+		RR42_RS29365	0.33	+0.1
1,940,009	+		RR42_RS29365	0.33	+0.4
1,940,010	-		RR42_RS29365	0.34	+3.3
1,940,010	-		RR42_RS29365	0.34	+0.6
1,940,234	+				-2.9
1,940,381	+				+0.2
1,940,381	+				-0.0
1,940,381	+				+0.4
1,940,382	-				-0.3
1,940,382	-				+1.2
1,940,382	-				-0.1
1,940,455	+				+1.0
1,940,455	+				-2.3
1,940,569	+				-0.8
1,940,569	+				+0.2
1,940,570	-				+0.1
1,940,570	-				+0.5
1,940,570	-				-0.1
1,940,570	-				-0.8
1,940,570	-				-2.8
1,940,570	-				+0.5
1,940,570	-				-0.1
1,940,574	+		RR42_RS29370	0.10	-0.3
1,940,574	+		RR42_RS29370	0.10	-0.6
1,940,625	+		RR42_RS29370	0.14	+2.8
1,940,626	-		RR42_RS29370	0.14	-0.5
1,940,626	-		RR42_RS29370	0.14	+0.1
1,940,692	+		RR42_RS29370	0.20	+0.2
1,940,909	+		RR42_RS29370	0.37	+1.5
1,941,032	-		RR42_RS29370	0.47	-0.4
1,941,157	+		RR42_RS29370	0.58	+0.5
1,941,157	+		RR42_RS29370	0.58	+0.8
1,941,171	+		RR42_RS29370	0.59	-0.4
1,941,171	+		RR42_RS29370	0.59	-0.0
1,941,171	+		RR42_RS29370	0.59	-1.7
1,941,310	+		RR42_RS29370	0.70	-0.9
1,941,310	+		RR42_RS29370	0.70	-1.1
1,941,412	+		RR42_RS29370	0.78	+0.1
1,941,413	-		RR42_RS29370	0.78	-0.9
1,941,509	-		RR42_RS29370	0.86	-0.3
1,941,509	-		RR42_RS29370	0.86	-0.7
1,941,526	-		RR42_RS29370	0.88	+0.9
1,941,526	-		RR42_RS29370	0.88	+0.4
1,941,798	+				-0.8
1,941,798	+				+0.3
1,941,798	+				-0.4
1,941,798	+				+0.9
1,941,799	-				+1.5
1,941,799	-				-0.6
1,941,910	-				-3.7
1,941,910	-				-2.1
1,941,921	+				-3.0
1,941,921	+				+0.9
1,941,921	+				+0.8
1,941,922	-				+1.2
1,941,922	-				+0.5
1,941,922	-				-0.8
1,941,942	+				-0.2
1,941,943	-				-0.0
1,942,009	-		RR42_RS29375	0.12	+0.0
1,942,056	+		RR42_RS29375	0.14	+0.0
1,942,057	-		RR42_RS29375	0.14	-0.4
1,942,107	+		RR42_RS29375	0.16	-0.1
1,942,107	+		RR42_RS29375	0.16	-0.1
1,942,107	+		RR42_RS29375	0.16	-0.1
1,942,107	+		RR42_RS29375	0.16	-2.6
1,942,108	-		RR42_RS29375	0.16	-0.3
1,942,206	+		RR42_RS29375	0.20	-1.1
1,942,207	-		RR42_RS29375	0.20	+0.6
1,942,207	-		RR42_RS29375	0.20	+0.0
1,942,243	-		RR42_RS29375	0.22	-0.8
1,942,297	-		RR42_RS29375	0.24	-1.1
1,942,297	-		RR42_RS29375	0.24	+1.5
1,942,297	-		RR42_RS29375	0.24	+1.2
1,942,453	-		RR42_RS29375	0.30	-0.2
1,942,453	-		RR42_RS29375	0.30	-0.0
1,942,453	-		RR42_RS29375	0.30	-0.0
1,942,453	-		RR42_RS29375	0.30	+0.4
1,942,469	-		RR42_RS29375	0.31	-0.4
1,942,478	-		RR42_RS29375	0.31	+2.2
1,942,639	-		RR42_RS29375	0.38	+0.3
1,942,639	-		RR42_RS29375	0.38	+0.9