Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS27125
Experiment: Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source Deoxyribonucleic from herring sperm 10 mg/mL |
---|---|---|---|---|---|
remove | |||||
1,436,536 | + | RR42_RS27115 | 0.76 | +0.0 | |
1,436,569 | + | RR42_RS27115 | 0.80 | +0.1 | |
1,436,954 | - | RR42_RS27120 | 0.40 | -2.1 | |
1,437,420 | + | RR42_RS27125 | 0.11 | +2.5 | |
1,437,420 | + | RR42_RS27125 | 0.11 | -0.8 | |
1,437,420 | + | RR42_RS27125 | 0.11 | -1.9 | |
1,437,421 | - | RR42_RS27125 | 0.11 | +2.0 | |
1,437,834 | + | RR42_RS27125 | 0.73 | -0.3 | |
1,437,835 | - | RR42_RS27125 | 0.73 | -0.1 | |
1,438,005 | + | +1.2 | |||
1,438,005 | + | -0.5 | |||
1,438,073 | - | -0.0 | |||
1,438,073 | - | -1.7 | |||
1,438,172 | + | -0.9 | |||
1,438,454 | + | RR42_RS27130 | 0.36 | -1.9 | |
1,438,454 | + | RR42_RS27130 | 0.36 | -0.6 | |
1,438,593 | + | RR42_RS27130 | 0.54 | -1.6 | |
1,438,595 | + | RR42_RS27130 | 0.54 | +0.8 | |
1,438,608 | - | RR42_RS27130 | 0.55 | -0.6 | |
1,438,608 | - | RR42_RS27130 | 0.55 | -0.5 | |
1,438,694 | + | RR42_RS27130 | 0.66 | +0.4 | |
1,438,957 | - | +0.4 | |||
1,438,957 | - | +0.9 | |||
1,438,969 | + | -0.5 | |||
1,438,969 | + | +0.8 | |||
1,438,970 | - | +0.9 | |||
1,438,970 | - | +0.6 | |||
1,439,007 | - | +0.6 |
Or see this region's nucleotide sequence