Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS26585

Experiment: Carbon source Deoxyribonucleic from herring sperm 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
1,317,147	+		RR42_RS26575	0.86	+0.6
1,317,147	+		RR42_RS26575	0.86	+1.0
1,317,147	+		RR42_RS26575	0.86	+1.7
1,317,147	+		RR42_RS26575	0.86	+0.5
1,317,148	-		RR42_RS26575	0.86	+0.0
1,317,148	-		RR42_RS26575	0.86	-1.5
1,317,148	-		RR42_RS26575	0.86	-0.1
1,317,148	-		RR42_RS26575	0.86	-1.0
1,317,196	-				-0.1
1,317,307	+		RR42_RS26580	0.14	-0.7
1,317,923	-				+0.2
1,317,937	+				+0.3
1,317,968	+				-0.1
1,317,969	-				-0.8
1,317,983	+				+0.2
1,317,983	+				+1.5
1,318,019	+				+0.8
1,318,019	+				-0.1
1,318,019	+				-1.1
1,318,019	+				-0.2
1,318,020	-				+0.6
1,318,072	+				+1.5
1,318,072	+				-3.0
1,318,080	-				-0.9
1,318,080	-				+0.1
1,318,124	+				-0.2
1,318,125	-				+0.7
1,318,125	-				-0.1
1,318,164	-				-0.3
1,318,176	+				-1.5
1,318,176	+				+0.0
1,318,177	-				-1.1
1,318,179	-				+0.4
1,318,297	-		RR42_RS26585	0.14	+2.6
1,318,297	-		RR42_RS26585	0.14	-0.1
1,318,304	+		RR42_RS26585	0.15	+1.1
1,318,304	+		RR42_RS26585	0.15	-0.0
1,318,304	+		RR42_RS26585	0.15	-3.6
1,318,304	+		RR42_RS26585	0.15	+1.4
1,318,304	+		RR42_RS26585	0.15	+0.7
1,318,304	+		RR42_RS26585	0.15	-1.1
1,318,304	+		RR42_RS26585	0.15	+1.0
1,318,305	-		RR42_RS26585	0.15	+1.0
1,318,305	-		RR42_RS26585	0.15	-0.6
1,318,305	-		RR42_RS26585	0.15	+0.5
1,318,305	-		RR42_RS26585	0.15	-0.1
1,318,305	-		RR42_RS26585	0.15	-0.1
1,318,305	-		RR42_RS26585	0.15	-1.3
1,318,305	-		RR42_RS26585	0.15	-1.1
1,318,305	-		RR42_RS26585	0.15	-0.1
1,318,305	-		RR42_RS26585	0.15	+1.0
1,318,305	-		RR42_RS26585	0.15	+1.4
1,318,305	-		RR42_RS26585	0.15	-0.8
1,318,337	+		RR42_RS26585	0.16	-1.5
1,318,337	+		RR42_RS26585	0.16	+0.2
1,318,337	+		RR42_RS26585	0.16	-0.9
1,318,337	+		RR42_RS26585	0.16	-1.6
1,318,338	-		RR42_RS26585	0.16	+1.0
1,318,338	-		RR42_RS26585	0.16	-0.3
1,318,338	-		RR42_RS26585	0.16	-0.5
1,318,338	-		RR42_RS26585	0.16	-1.3
1,318,438	-		RR42_RS26585	0.20	+0.9
1,318,502	+		RR42_RS26585	0.23	+0.3
1,318,637	+		RR42_RS26585	0.29	+0.1
1,318,799	+		RR42_RS26585	0.36	+1.3
1,318,799	+		RR42_RS26585	0.36	-1.1
1,318,800	-		RR42_RS26585	0.36	-0.2
1,318,970	+		RR42_RS26585	0.43	+1.3
1,318,971	-		RR42_RS26585	0.43	-1.1
1,318,971	-		RR42_RS26585	0.43	+0.1
1,319,000	+		RR42_RS26585	0.44	-0.0
1,319,135	+		RR42_RS26585	0.50	-0.6
1,319,135	+		RR42_RS26585	0.50	-2.9
1,319,171	+		RR42_RS26585	0.51	+0.4
1,319,172	-		RR42_RS26585	0.51	-0.2
1,319,172	-		RR42_RS26585	0.51	-0.4
1,319,174	+		RR42_RS26585	0.52	-2.2
1,319,174	+		RR42_RS26585	0.52	+0.6
1,319,175	-		RR42_RS26585	0.52	+0.4
1,319,303	+		RR42_RS26585	0.57	+0.1
1,319,345	+		RR42_RS26585	0.59	-0.0
1,319,376	-		RR42_RS26585	0.60	+0.5
1,319,423	+		RR42_RS26585	0.62	-1.7
1,319,453	+		RR42_RS26585	0.63	-0.3
1,319,487	+		RR42_RS26585	0.65	+0.5
1,319,488	-		RR42_RS26585	0.65	+0.7
1,319,513	-		RR42_RS26585	0.66	+0.9
1,319,549	+		RR42_RS26585	0.67	+0.2
1,319,732	+		RR42_RS26585	0.75	-0.5
1,319,822	+		RR42_RS26585	0.79	-3.5
1,319,822	+		RR42_RS26585	0.79	+0.5
1,319,823	-		RR42_RS26585	0.79	-0.3
1,319,823	-		RR42_RS26585	0.79	-0.1
1,319,858	+		RR42_RS26585	0.81	+0.3
1,319,858	+		RR42_RS26585	0.81	+1.3
1,319,858	+		RR42_RS26585	0.81	-0.2
1,319,858	+		RR42_RS26585	0.81	+0.7
1,319,858	+		RR42_RS26585	0.81	+0.7
1,319,858	+		RR42_RS26585	0.81	+1.5
1,319,858	+		RR42_RS26585	0.81	-1.7
1,319,858	+		RR42_RS26585	0.81	-0.4
1,319,858	+		RR42_RS26585	0.81	+0.7
1,319,858	+		RR42_RS26585	0.81	+1.2
1,319,859	-		RR42_RS26585	0.81	+0.6
1,319,859	-		RR42_RS26585	0.81	+0.5
1,319,859	-		RR42_RS26585	0.81	-0.1
1,319,859	-		RR42_RS26585	0.81	+1.2
1,319,859	-		RR42_RS26585	0.81	+0.1
1,319,859	-		RR42_RS26585	0.81	-2.3
1,319,966	+		RR42_RS26585	0.85	-0.1
1,319,967	-		RR42_RS26585	0.85	-1.3
1,320,036	+		RR42_RS26585	0.88	+0.3
1,320,068	+		RR42_RS26585	0.89	-1.0
1,320,068	+		RR42_RS26585	0.89	-1.0
1,320,069	-		RR42_RS26585	0.90	-0.9
1,320,253	+				-2.6
1,320,284	-				+0.8
1,320,359	+				+0.1
1,320,377	-				-2.5
1,320,536	+		RR42_RS26590	0.47	-0.8
1,320,736	+				-2.6
1,320,737	-				+0.6
1,320,737	-				+0.8
1,320,865	-				-0.2
1,320,948	+				+0.2
1,320,948	+				+0.7
1,320,948	+				+0.7
1,320,949	-				+0.5
1,320,949	-				-0.5
1,321,004	+				-0.8
1,321,004	+				+0.3
1,321,004	+				+0.7
1,321,005	-				+0.3
1,321,005	-				-1.6
1,321,005	-				+1.5
1,321,085	+		RR42_RS26595	0.15	-0.2
1,321,174	-		RR42_RS26595	0.22	-0.8
1,321,195	-		RR42_RS26595	0.23	-0.2
1,321,195	-		RR42_RS26595	0.23	-0.2
1,321,207	-		RR42_RS26595	0.24	-0.2
1,321,207	-		RR42_RS26595	0.24	+1.6
1,321,207	-		RR42_RS26595	0.24	-0.3
1,321,242	+		RR42_RS26595	0.27	+0.1
1,321,267	-		RR42_RS26595	0.28	+1.4
1,321,281	-		RR42_RS26595	0.29	+3.0
1,321,294	+		RR42_RS26595	0.30	-0.8
1,321,294	+		RR42_RS26595	0.30	-0.2
1,321,295	-		RR42_RS26595	0.30	-0.2
1,321,295	-		RR42_RS26595	0.30	+0.7
1,321,295	-		RR42_RS26595	0.30	+1.4
1,321,304	+		RR42_RS26595	0.31	+0.2
1,321,304	+		RR42_RS26595	0.31	-1.3
1,321,305	-		RR42_RS26595	0.31	-0.9
1,321,305	-		RR42_RS26595	0.31	-0.7