Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS26300

Experiment: Carbon source Deoxyribonucleic from herring sperm 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
1,258,983	+				-0.4
1,258,997	-				-1.1
1,259,041	+				-0.6
1,259,042	-				+0.9
1,259,131	-				+1.3
1,259,131	-				+1.4
1,259,189	-				-2.1
1,259,323	+		RR42_RS26295	0.28	-0.4
1,259,323	+		RR42_RS26295	0.28	+0.6
1,259,324	-		RR42_RS26295	0.28	+0.0
1,259,324	-		RR42_RS26295	0.28	+0.1
1,259,324	-		RR42_RS26295	0.28	-0.1
1,259,394	+		RR42_RS26295	0.38	+1.1
1,259,394	+		RR42_RS26295	0.38	+0.0
1,259,398	+		RR42_RS26295	0.38	+0.2
1,259,399	-		RR42_RS26295	0.38	+1.2
1,259,399	-		RR42_RS26295	0.38	+0.9
1,259,399	-		RR42_RS26295	0.38	+1.0
1,259,602	-		RR42_RS26295	0.66	+0.0
1,259,654	-		RR42_RS26295	0.73	+0.5
1,259,654	-		RR42_RS26295	0.73	+0.5
1,259,654	-		RR42_RS26295	0.73	+0.7
1,259,680	+		RR42_RS26295	0.77	+1.3
1,259,681	-		RR42_RS26295	0.77	+0.0
1,259,872	-				-0.6
1,259,893	+				+1.0
1,259,948	-				+0.5
1,260,174	+		RR42_RS26300	0.17	-0.6
1,260,174	+		RR42_RS26300	0.17	+0.6
1,260,219	+		RR42_RS26300	0.21	+0.0
1,260,219	+		RR42_RS26300	0.21	+1.0
1,260,219	+		RR42_RS26300	0.21	-1.0
1,260,220	-		RR42_RS26300	0.21	+1.0
1,260,222	-		RR42_RS26300	0.21	-3.4
1,260,668	+		RR42_RS26300	0.59	-1.4
1,261,229	+				+0.8
1,261,256	-				+2.4
1,261,256	-				+0.6
1,261,256	-				-0.3
1,261,256	-				+0.5
1,261,397	+				+0.5
1,261,397	+				-1.8
1,261,397	+				+0.3
1,261,398	-				-2.3
1,261,520	+				+0.7
1,261,521	-				-0.6
1,261,535	+				+0.8
1,261,536	-				+0.2
1,261,756	+				+2.0
1,261,757	-				+0.3
1,261,757	-				+0.8
1,261,757	-				-2.9
1,261,757	-				-0.8
1,261,796	+		RR42_RS26305	0.11	-0.1
1,261,796	+		RR42_RS26305	0.11	-0.6
1,261,797	-		RR42_RS26305	0.11	-0.3
1,261,797	-		RR42_RS26305	0.11	-0.2
1,261,899	+		RR42_RS26305	0.43	-1.8
1,261,935	+		RR42_RS26305	0.54	-0.1
1,261,935	+		RR42_RS26305	0.54	+2.6