Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS26080
Experiment: Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source Deoxyribonucleic from herring sperm 10 mg/mL |
---|---|---|---|---|---|
remove | |||||
1,200,149 | + | RR42_RS26075 | 0.63 | -0.3 | |
1,200,150 | - | RR42_RS26075 | 0.64 | +0.1 | |
1,200,327 | - | RR42_RS26075 | 0.77 | -1.7 | |
1,200,348 | + | RR42_RS26075 | 0.79 | -0.1 | |
1,200,465 | - | RR42_RS26075 | 0.88 | -0.4 | |
1,200,573 | + | -0.1 | |||
1,200,573 | + | -0.9 | |||
1,200,967 | + | RR42_RS26080 | 0.38 | +1.2 | |
1,201,372 | + | -0.3 | |||
1,201,372 | + | -0.9 | |||
1,201,372 | + | +0.8 | |||
1,201,373 | - | -0.3 | |||
1,201,373 | - | +0.6 | |||
1,201,398 | - | +1.0 | |||
1,201,398 | - | -3.6 | |||
1,201,398 | - | +0.6 | |||
1,201,513 | - | +0.7 | |||
1,201,694 | - | RR42_RS26085 | 0.34 | -0.6 | |
1,201,726 | - | RR42_RS26085 | 0.38 | +0.6 | |
1,201,726 | - | RR42_RS26085 | 0.38 | +1.2 | |
1,202,025 | + | RR42_RS26085 | 0.78 | -0.0 | |
1,202,168 | + | -1.5 | |||
1,202,169 | - | -2.4 |
Or see this region's nucleotide sequence