Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS25650

Experiment: Carbon source Deoxyribonucleic from herring sperm 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
1,097,089	+				-2.9
1,097,089	+				+0.8
1,097,089	+				-0.1
1,097,097	-				+0.7
1,097,250	+		RR42_RS25645	0.79	+0.5
1,097,250	+		RR42_RS25645	0.79	-1.0
1,097,251	-		RR42_RS25645	0.80	-1.2
1,097,251	-		RR42_RS25645	0.80	-3.0
1,097,294	+				-0.0
1,097,295	-				-3.5
1,097,295	-				-0.8
1,097,295	-				-0.4
1,097,338	+				-1.7
1,097,338	+				-0.1
1,097,338	+				+0.2
1,097,339	-				+0.8
1,097,339	-				-1.6
1,097,460	-				-2.2
1,097,610	-				-0.1
1,097,610	-				-2.4
1,097,610	-				-1.6
1,097,613	-				+0.0
1,097,613	-				+0.3
1,097,704	+		RR42_RS25650	0.49	-2.5
1,097,704	+		RR42_RS25650	0.49	+0.6
1,097,798	+				-0.8
1,097,799	-				+0.5
1,097,799	-				-1.4
1,097,901	+				+0.2
1,097,908	+				-0.8
1,097,908	+				+1.6
1,097,989	-				+0.7
1,098,000	-				-0.7
1,098,007	+				+0.9
1,098,059	-				-0.4
1,098,095	-				+0.4
1,098,508	+		RR42_RS25655	0.17	-0.1
1,098,508	+		RR42_RS25655	0.17	-0.5
1,098,508	+		RR42_RS25655	0.17	-0.1
1,098,509	-		RR42_RS25655	0.17	+0.0
1,098,509	-		RR42_RS25655	0.17	-1.0
1,098,589	+		RR42_RS25655	0.20	-1.5
1,098,589	+		RR42_RS25655	0.20	-1.6
1,098,590	-		RR42_RS25655	0.20	+0.4
1,098,590	-		RR42_RS25655	0.20	+1.4
1,098,603	+		RR42_RS25655	0.20	+0.8
1,098,604	-		RR42_RS25655	0.20	-2.1
1,098,604	-		RR42_RS25655	0.20	-0.6
1,098,772	+		RR42_RS25655	0.25	+0.4
1,098,772	+		RR42_RS25655	0.25	-1.6
1,098,773	-		RR42_RS25655	0.25	-2.2