Experiment: Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS24480 and RR42_RS24485 are separated by 182 nucleotides RR42_RS24485 and RR42_RS24490 are separated by 60 nucleotides RR42_RS24490 and RR42_RS24495 are separated by 487 nucleotides
RR42_RS24480: RR42_RS24480 - hypothetical protein, at 826,679 to 827,011
_RS24480
RR42_RS24485: RR42_RS24485 - hypothetical protein, at 827,194 to 827,631
_RS24485
RR42_RS24490: RR42_RS24490 - hypothetical protein, at 827,692 to 828,036
_RS24490
RR42_RS24495: RR42_RS24495 - hypothetical protein, at 828,524 to 829,540
_RS24495
Position (kb) 827
828
829 Strain fitness (log2 ratio) -2
-1
0
1 at 826.719 kb on + strand, within RR42_RS24480 at 826.719 kb on + strand, within RR42_RS24480 at 826.825 kb on - strand, within RR42_RS24480 at 826.878 kb on + strand, within RR42_RS24480 at 826.879 kb on - strand, within RR42_RS24480 at 826.879 kb on - strand, within RR42_RS24480 at 826.879 kb on - strand, within RR42_RS24480 at 826.995 kb on + strand at 827.333 kb on + strand, within RR42_RS24485 at 827.368 kb on - strand, within RR42_RS24485 at 827.403 kb on + strand, within RR42_RS24485 at 827.403 kb on + strand, within RR42_RS24485 at 827.466 kb on - strand, within RR42_RS24485 at 827.495 kb on + strand, within RR42_RS24485 at 827.496 kb on - strand, within RR42_RS24485 at 827.496 kb on - strand, within RR42_RS24485 at 827.496 kb on - strand, within RR42_RS24485 at 827.529 kb on - strand, within RR42_RS24485 at 827.567 kb on + strand, within RR42_RS24485 at 827.567 kb on + strand, within RR42_RS24485 at 827.567 kb on + strand, within RR42_RS24485 at 827.910 kb on - strand, within RR42_RS24490 at 827.936 kb on + strand, within RR42_RS24490 at 828.053 kb on + strand at 828.053 kb on + strand at 828.058 kb on - strand at 828.058 kb on - strand at 828.112 kb on - strand at 828.135 kb on + strand at 828.135 kb on + strand at 828.135 kb on + strand at 828.135 kb on + strand at 828.136 kb on - strand at 828.267 kb on + strand at 828.323 kb on + strand at 828.324 kb on - strand at 828.324 kb on - strand at 828.325 kb on + strand at 828.325 kb on + strand at 828.357 kb on - strand at 828.357 kb on - strand at 828.626 kb on - strand, within RR42_RS24495 at 828.626 kb on - strand, within RR42_RS24495 at 828.665 kb on + strand, within RR42_RS24495 at 828.665 kb on + strand, within RR42_RS24495 at 828.666 kb on - strand, within RR42_RS24495 at 828.680 kb on + strand, within RR42_RS24495 at 828.828 kb on + strand, within RR42_RS24495 at 828.897 kb on + strand, within RR42_RS24495 at 828.933 kb on + strand, within RR42_RS24495 at 828.933 kb on + strand, within RR42_RS24495
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Deoxyribonucleic from herring sperm 10 mg/mL remove 826,719 + RR42_RS24480 0.12 +0.3 826,719 + RR42_RS24480 0.12 +1.1 826,825 - RR42_RS24480 0.44 -0.6 826,878 + RR42_RS24480 0.60 -2.2 826,879 - RR42_RS24480 0.60 -0.2 826,879 - RR42_RS24480 0.60 +0.8 826,879 - RR42_RS24480 0.60 -0.0 826,995 + +0.2 827,333 + RR42_RS24485 0.32 +0.4 827,368 - RR42_RS24485 0.40 -2.6 827,403 + RR42_RS24485 0.48 +0.2 827,403 + RR42_RS24485 0.48 -1.1 827,466 - RR42_RS24485 0.62 +0.7 827,495 + RR42_RS24485 0.69 +0.1 827,496 - RR42_RS24485 0.69 -0.1 827,496 - RR42_RS24485 0.69 +0.2 827,496 - RR42_RS24485 0.69 -0.5 827,529 - RR42_RS24485 0.76 -1.7 827,567 + RR42_RS24485 0.85 -1.5 827,567 + RR42_RS24485 0.85 -0.6 827,567 + RR42_RS24485 0.85 +1.0 827,910 - RR42_RS24490 0.63 -1.1 827,936 + RR42_RS24490 0.71 -0.5 828,053 + +0.4 828,053 + -0.5 828,058 - +0.2 828,058 - -2.4 828,112 - -0.8 828,135 + +0.7 828,135 + -1.4 828,135 + +1.0 828,135 + -1.1 828,136 - -1.8 828,267 + +0.7 828,323 + +0.3 828,324 - +0.0 828,324 - -0.7 828,325 + +0.9 828,325 + +0.0 828,357 - -1.7 828,357 - -0.4 828,626 - RR42_RS24495 0.10 +1.0 828,626 - RR42_RS24495 0.10 +1.4 828,665 + RR42_RS24495 0.14 -0.2 828,665 + RR42_RS24495 0.14 -2.4 828,666 - RR42_RS24495 0.14 +0.8 828,680 + RR42_RS24495 0.15 -2.1 828,828 + RR42_RS24495 0.30 +1.2 828,897 + RR42_RS24495 0.37 +0.5 828,933 + RR42_RS24495 0.40 +0.8 828,933 + RR42_RS24495 0.40 -0.6
Or see this region's nucleotide sequence