Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS20500

Experiment: Carbon source Deoxyribonucleic from herring sperm 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
4,441,398	-		RR42_RS20495	0.19	-0.6
4,441,493	-		RR42_RS20495	0.30	-0.6
4,441,610	+		RR42_RS20495	0.43	-0.1
4,441,610	+		RR42_RS20495	0.43	-1.7
4,441,610	+		RR42_RS20495	0.43	-0.5
4,441,610	+		RR42_RS20495	0.43	+1.0
4,441,611	-		RR42_RS20495	0.43	-1.6
4,441,702	+		RR42_RS20495	0.53	+0.1
4,441,703	-		RR42_RS20495	0.53	-1.8
4,441,703	-		RR42_RS20495	0.53	-1.5
4,441,703	-		RR42_RS20495	0.53	-1.3
4,441,703	-		RR42_RS20495	0.53	+0.5
4,441,703	-		RR42_RS20495	0.53	+0.3
4,441,734	+		RR42_RS20495	0.57	+0.5
4,441,772	+		RR42_RS20495	0.61	+0.1
4,441,773	-		RR42_RS20495	0.61	-2.4
4,441,773	-		RR42_RS20495	0.61	+1.5
4,441,931	+		RR42_RS20495	0.79	+1.1
4,441,931	+		RR42_RS20495	0.79	-1.4
4,441,931	+		RR42_RS20495	0.79	+0.6
4,441,932	-		RR42_RS20495	0.79	+0.2
4,441,932	-		RR42_RS20495	0.79	-0.4
4,441,932	-		RR42_RS20495	0.79	+2.1
4,441,932	-		RR42_RS20495	0.79	+0.2
4,441,932	-		RR42_RS20495	0.79	-1.3
4,441,932	-		RR42_RS20495	0.79	+0.1
4,442,018	+		RR42_RS20495	0.88	+0.5
4,442,018	+		RR42_RS20495	0.88	-1.7
4,442,019	-		RR42_RS20495	0.88	+0.6
4,442,019	-		RR42_RS20495	0.88	-0.3
4,442,019	-		RR42_RS20495	0.88	-1.5
4,442,129	+				-1.0
4,442,129	+				-0.3
4,442,129	+				-0.5
4,442,129	+				-0.8
4,442,129	+				-0.6
4,442,129	+				-0.1
4,442,129	+				-0.7
4,442,129	+				+1.0
4,442,129	+				+0.5
4,442,129	+				-0.1
4,442,129	+				+0.4
4,442,129	+				+0.2
4,442,130	-				+1.7
4,442,130	-				-0.6
4,442,130	-				-0.6
4,442,130	-				-0.4
4,442,130	-				-0.0
4,442,130	-				-0.4
4,442,130	-				+0.4
4,442,130	-				-1.0
4,442,192	+				+2.2
4,442,192	+				+0.8
4,442,192	+				-0.8
4,442,237	-				+0.5
4,442,240	-				+1.7
4,442,416	+		RR42_RS20500	0.32	+1.7
4,442,416	+		RR42_RS20500	0.32	+1.5
4,442,416	+		RR42_RS20500	0.32	-0.6
4,442,416	+		RR42_RS20500	0.32	+0.3
4,442,417	-		RR42_RS20500	0.33	+1.2
4,442,417	-		RR42_RS20500	0.33	+2.2
4,442,452	+		RR42_RS20500	0.44	+1.2
4,442,452	+		RR42_RS20500	0.44	+1.4
4,442,452	+		RR42_RS20500	0.44	+0.3
4,442,452	+		RR42_RS20500	0.44	-0.9
4,442,453	-		RR42_RS20500	0.44	+2.1
4,442,453	-		RR42_RS20500	0.44	+1.4
4,442,560	+		RR42_RS20500	0.79	+0.1
4,442,560	+		RR42_RS20500	0.79	+0.1
4,442,594	+				-1.5
4,442,620	+				-1.8
4,442,620	+				-0.5
4,442,621	-				+0.6
4,442,724	-				+1.8
4,442,726	+				-0.2
4,442,726	+				-0.3
4,442,727	-				+1.0
4,442,727	-				+1.7
4,442,792	+				+0.9
4,442,857	-				+0.3
4,443,017	+		RR42_RS20505	0.12	+0.6
4,443,021	-		RR42_RS20505	0.13	-1.4
4,443,059	+		RR42_RS20505	0.21	+0.3
4,443,059	+		RR42_RS20505	0.21	+0.6
4,443,060	-		RR42_RS20505	0.21	-0.9
4,443,348	+		RR42_RS20505	0.82	+0.8
4,443,348	+		RR42_RS20505	0.82	+0.0
4,443,348	+		RR42_RS20505	0.82	-0.3
4,443,348	+		RR42_RS20505	0.82	+0.2
4,443,349	-		RR42_RS20505	0.82	+0.2
4,443,349	-		RR42_RS20505	0.82	-3.9
4,443,349	-		RR42_RS20505	0.82	-0.4
4,443,354	+		RR42_RS20505	0.83	+0.2
4,443,471	+				+0.4
4,443,472	-				-0.0
4,443,472	-				-0.5
4,443,472	-				+0.3
4,443,472	-				-1.2
4,443,496	+				-1.3
4,443,497	-				+0.2
4,443,506	+				-1.2
4,443,506	+				-0.5
4,443,506	+				+0.3
4,443,507	-				-1.7
4,443,507	-				-0.7
4,443,507	-				+0.3
4,443,507	-				+0.3
4,443,507	-				+1.6
4,443,598	+				-0.1
4,443,599	-				-0.3