Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS17915

Experiment: Carbon source Deoxyribonucleic from herring sperm 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
3,875,769	-				+0.2
3,875,886	+				-0.2
3,875,886	+				+1.0
3,875,886	+				+1.4
3,875,886	+				-0.4
3,875,887	-				+0.1
3,875,887	-				-0.9
3,875,887	-				+1.5
3,875,887	-				+0.7
3,875,931	+				+0.1
3,875,932	-				-1.0
3,876,078	+		RR42_RS17910	0.20	+0.9
3,876,129	+		RR42_RS17910	0.26	-1.0
3,876,375	+		RR42_RS17910	0.55	-0.2
3,876,375	+		RR42_RS17910	0.55	-0.2
3,876,375	+		RR42_RS17910	0.55	+0.7
3,876,375	+		RR42_RS17910	0.55	-0.6
3,876,375	+		RR42_RS17910	0.55	+0.4
3,876,375	+		RR42_RS17910	0.55	-0.4
3,876,376	-		RR42_RS17910	0.55	-0.7
3,876,376	-		RR42_RS17910	0.55	+0.4
3,876,376	-		RR42_RS17910	0.55	-0.2
3,876,376	-		RR42_RS17910	0.55	+1.5
3,876,376	-		RR42_RS17910	0.55	+0.6
3,876,379	+		RR42_RS17910	0.56	-1.6
3,876,379	+		RR42_RS17910	0.56	-1.2
3,876,379	+		RR42_RS17910	0.56	+0.2
3,876,380	-		RR42_RS17910	0.56	+0.8
3,876,380	-		RR42_RS17910	0.56	-0.2
3,876,489	+		RR42_RS17910	0.69	-0.6
3,876,644	-		RR42_RS17910	0.87	+0.5
3,876,693	+				+0.3
3,876,693	+				+0.4
3,876,693	+				+0.4
3,876,693	+				+0.5
3,876,694	-				-1.3
3,876,694	-				+0.8
3,876,694	-				+0.2
3,876,694	-				+0.8
3,876,694	-				-0.5
3,876,694	-				+0.2
3,876,694	-				-2.8
3,876,694	-				+1.4
3,876,718	-				+0.8
3,876,869	+		RR42_RS17915	0.12	-1.3
3,876,878	+		RR42_RS17915	0.13	-0.5
3,876,962	+		RR42_RS17915	0.22	-0.8
3,876,962	+		RR42_RS17915	0.22	+0.1
3,876,962	+		RR42_RS17915	0.22	+0.4
3,876,963	-		RR42_RS17915	0.22	-0.2
3,876,963	-		RR42_RS17915	0.22	-0.5
3,877,043	+		RR42_RS17915	0.31	-0.6
3,877,055	+		RR42_RS17915	0.32	-0.4
3,877,073	+		RR42_RS17915	0.34	+0.4
3,877,073	+		RR42_RS17915	0.34	-0.4
3,877,073	+		RR42_RS17915	0.34	+0.1
3,877,073	+		RR42_RS17915	0.34	-0.2
3,877,073	+		RR42_RS17915	0.34	+0.4
3,877,074	-		RR42_RS17915	0.34	-0.4
3,877,074	-		RR42_RS17915	0.34	+0.7
3,877,273	+		RR42_RS17915	0.55	-1.6
3,877,273	+		RR42_RS17915	0.55	-2.2
3,877,273	+		RR42_RS17915	0.55	+0.3
3,877,313	+		RR42_RS17915	0.59	-0.2
3,877,314	-		RR42_RS17915	0.59	-1.2
3,877,384	-		RR42_RS17915	0.67	+1.9
3,877,384	-		RR42_RS17915	0.67	+0.8
3,877,655	+				+0.5
3,877,865	-		RR42_RS17920	0.22	+0.7
3,877,891	+		RR42_RS17920	0.26	+0.6
3,877,892	-		RR42_RS17920	0.26	+1.6
3,877,936	+		RR42_RS17920	0.32	+1.5
3,877,936	+		RR42_RS17920	0.32	-0.7
3,877,936	+		RR42_RS17920	0.32	+1.5
3,877,936	+		RR42_RS17920	0.32	+1.0
3,877,937	-		RR42_RS17920	0.32	-0.2
3,877,937	-		RR42_RS17920	0.32	+0.5
3,877,960	+		RR42_RS17920	0.35	-1.0
3,878,034	+		RR42_RS17920	0.45	+1.6
3,878,034	+		RR42_RS17920	0.45	+2.1
3,878,034	+		RR42_RS17920	0.45	+0.9
3,878,035	-		RR42_RS17920	0.45	+1.3
3,878,035	-		RR42_RS17920	0.45	+2.0
3,878,035	-		RR42_RS17920	0.45	+0.5
3,878,035	-		RR42_RS17920	0.45	+0.7
3,878,035	-		RR42_RS17920	0.45	-0.1
3,878,075	-		RR42_RS17920	0.50	+0.5
3,878,075	-		RR42_RS17920	0.50	+1.2
3,878,075	-		RR42_RS17920	0.50	-1.2
3,878,149	+				-1.0
3,878,149	+		RR42_RS17920	0.60	+0.4
3,878,149	+		RR42_RS17920	0.60	+0.5
3,878,149	+		RR42_RS17920	0.60	+1.1
3,878,150	-		RR42_RS17920	0.61	+0.5
3,878,150	-		RR42_RS17920	0.61	+1.2
3,878,150	-		RR42_RS17920	0.61	-0.1
3,878,152	+		RR42_RS17920	0.61	+0.2
3,878,152	+		RR42_RS17920	0.61	-1.6
3,878,239	+		RR42_RS17920	0.72	+1.0