Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS17890

Experiment: Carbon source Deoxyribonucleic from herring sperm 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
3,871,395	+				-0.4
3,871,395	+				+0.9
3,871,395	+				+1.4
3,871,396	-				+0.8
3,871,461	+		RR42_RS17885	0.12	-0.7
3,871,462	-		RR42_RS17885	0.12	+1.9
3,871,462	-		RR42_RS17885	0.12	-1.1
3,871,798	-		RR42_RS17885	0.48	-0.6
3,871,962	+		RR42_RS17885	0.66	+0.2
3,872,244	+				-0.1
3,872,245	-				+1.0
3,872,265	+				-1.2
3,872,265	+				+0.9
3,872,265	+				+1.2
3,872,266	-				-0.1
3,872,270	+				+2.7
3,872,270	+				+1.0
3,872,270	+				-0.7
3,872,270	+				-1.5
3,872,270	+				+1.1
3,872,270	+				+1.2
3,872,270	+				+1.4
3,872,270	+				+1.9
3,872,271	-				+0.3
3,872,292	+				+0.2
3,872,292	+				+0.6
3,874,069	+		RR42_RS17895	0.39	-0.5
3,874,070	-		RR42_RS17895	0.39	-1.2
3,874,088	-		RR42_RS17895	0.42	+0.1
3,874,246	+		RR42_RS17895	0.71	+0.8
3,874,246	+		RR42_RS17895	0.71	+0.7
3,874,246	+		RR42_RS17895	0.71	+0.8
3,874,247	-		RR42_RS17895	0.71	-0.5
3,874,247	-		RR42_RS17895	0.71	+0.5
3,874,247	-		RR42_RS17895	0.71	+0.7
3,874,330	+		RR42_RS17895	0.87	+0.6
3,874,331	-		RR42_RS17895	0.87	+0.4
3,874,363	+				+0.8
3,874,364	-				-0.1
3,874,399	+				+1.4
3,874,575	+		RR42_RS17900	0.28	+0.7
3,874,575	+		RR42_RS17900	0.28	-0.9
3,874,575	+		RR42_RS17900	0.28	-1.0
3,874,575	+		RR42_RS17900	0.28	+1.9
3,874,576	-		RR42_RS17900	0.28	+0.2
3,874,576	-		RR42_RS17900	0.28	-0.3
3,874,576	-		RR42_RS17900	0.28	+2.4
3,874,576	-		RR42_RS17900	0.28	+0.7
3,874,576	-		RR42_RS17900	0.28	+0.1
3,874,576	-		RR42_RS17900	0.28	+0.5
3,874,576	-		RR42_RS17900	0.28	+1.9
3,874,576	-		RR42_RS17900	0.28	+1.4
3,874,606	+		RR42_RS17900	0.33	-0.2
3,874,606	+		RR42_RS17900	0.33	-0.5
3,874,606	+		RR42_RS17900	0.33	+0.5
3,874,606	+		RR42_RS17900	0.33	-0.6
3,874,606	+		RR42_RS17900	0.33	-2.1
3,874,606	+		RR42_RS17900	0.33	-1.2
3,874,607	-		RR42_RS17900	0.33	+0.1
3,874,607	-		RR42_RS17900	0.33	+0.8
3,874,607	-		RR42_RS17900	0.33	-0.1
3,874,607	-		RR42_RS17900	0.33	+0.3
3,874,607	-		RR42_RS17900	0.33	+0.2
3,874,607	-		RR42_RS17900	0.33	-1.6
3,874,607	-		RR42_RS17900	0.33	-0.5
3,874,610	+		RR42_RS17900	0.33	+0.1
3,874,610	+		RR42_RS17900	0.33	+0.2
3,874,610	+		RR42_RS17900	0.33	+1.1
3,874,611	-		RR42_RS17900	0.34	+1.7
3,874,611	-		RR42_RS17900	0.34	+0.5
3,874,611	-		RR42_RS17900	0.34	+0.8
3,874,753	+		RR42_RS17900	0.56	+1.6
3,874,754	-		RR42_RS17900	0.56	-0.5