Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS17360
Experiment: Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source Deoxyribonucleic from herring sperm 10 mg/mL |
---|---|---|---|---|---|
remove | |||||
3,756,058 | - | RR42_RS17350 | 0.85 | -0.5 | |
3,756,058 | - | RR42_RS17350 | 0.85 | -2.4 | |
3,756,058 | - | RR42_RS17350 | 0.85 | +1.3 | |
3,756,058 | - | RR42_RS17350 | 0.85 | +1.3 | |
3,756,058 | - | RR42_RS17350 | 0.85 | +0.5 | |
3,756,113 | - | +1.1 | |||
3,756,191 | + | -0.2 | |||
3,756,191 | + | +0.1 | |||
3,756,195 | - | +1.7 | |||
3,756,213 | + | +0.8 | |||
3,756,213 | + | +0.1 | |||
3,756,213 | + | -2.0 | |||
3,756,213 | + | -0.6 | |||
3,756,214 | - | +0.9 | |||
3,756,214 | - | -1.6 | |||
3,756,214 | - | -0.0 | |||
3,756,214 | - | -0.3 | |||
3,756,215 | + | -0.0 | |||
3,756,215 | + | -0.1 | |||
3,756,238 | + | -0.2 | |||
3,756,238 | + | -1.5 | |||
3,756,249 | + | +0.6 | |||
3,756,259 | + | -0.3 | |||
3,756,273 | + | +1.5 | |||
3,756,445 | + | RR42_RS17355 | 0.23 | +2.5 | |
3,757,961 | + | -3.4 | |||
3,757,961 | + | -2.1 | |||
3,757,961 | + | -1.7 | |||
3,757,961 | + | -1.5 | |||
3,757,962 | - | -1.4 |
Or see this region's nucleotide sequence