Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS17170
Experiment: Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Carbon source Deoxyribonucleic from herring sperm 10 mg/mL |
|---|---|---|---|---|---|
| remove | |||||
| 3,716,586 | + | +0.7 | |||
| 3,716,587 | - | +0.2 | |||
| 3,716,627 | + | +0.8 | |||
| 3,716,699 | + | RR42_RS17165 | 0.29 | +2.1 | |
| 3,716,699 | + | RR42_RS17165 | 0.29 | +1.6 | |
| 3,716,699 | + | RR42_RS17165 | 0.29 | -1.0 | |
| 3,716,700 | - | RR42_RS17165 | 0.29 | -0.2 | |
| 3,716,899 | + | -0.1 | |||
| 3,716,900 | - | -1.3 | |||
| 3,716,900 | - | +0.3 | |||
| 3,716,900 | - | -0.3 | |||
| 3,716,922 | + | -0.6 | |||
| 3,716,922 | + | -0.1 | |||
| 3,716,922 | + | -0.1 | |||
| 3,716,922 | + | -0.0 | |||
| 3,718,288 | - | +3.9 | |||
| 3,718,460 | + | +0.4 |
Or see this region's nucleotide sequence