Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15735

Experiment: Carbon source Deoxyribonucleic from herring sperm 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
3,400,225	+		RR42_RS15725	0.60	+0.2
3,400,226	-		RR42_RS15725	0.61	-0.0
3,400,559	+				+0.0
3,400,598	-		RR42_RS15730	0.12	+1.2
3,400,598	-		RR42_RS15730	0.12	+1.2
3,400,598	-		RR42_RS15730	0.12	+1.6
3,400,610	-		RR42_RS15730	0.14	-2.5
3,400,641	-		RR42_RS15730	0.19	-0.6
3,400,642	+		RR42_RS15730	0.19	+1.9
3,400,643	-		RR42_RS15730	0.19	+1.8
3,400,643	-		RR42_RS15730	0.19	-0.1
3,400,762	+		RR42_RS15730	0.39	+2.3
3,400,774	+		RR42_RS15730	0.41	+1.3
3,400,774	+		RR42_RS15730	0.41	+0.7
3,400,775	-		RR42_RS15730	0.42	+0.7
3,400,775	-		RR42_RS15730	0.42	+1.4
3,400,775	-		RR42_RS15730	0.42	+1.0
3,400,775	-		RR42_RS15730	0.42	+2.8
3,400,858	+		RR42_RS15730	0.55	+1.0
3,400,858	+		RR42_RS15730	0.55	+0.7
3,400,890	-		RR42_RS15730	0.61	+1.5
3,400,958	+		RR42_RS15730	0.72	+1.6
3,400,958	+		RR42_RS15730	0.72	+1.5
3,400,959	-		RR42_RS15730	0.72	+1.8
3,401,059	-		RR42_RS15730	0.89	+1.9
3,401,129	-				-1.3
3,401,179	+				+1.5
3,401,187	+				-1.6
3,401,200	+				+1.6
3,401,200	+				+2.2
3,401,214	+				+1.9
3,401,271	+		RR42_RS15735	0.13	+0.6
3,401,296	-		RR42_RS15735	0.15	-0.1
3,401,296	-		RR42_RS15735	0.15	+1.9
3,401,306	-		RR42_RS15735	0.16	+2.0
3,401,385	+		RR42_RS15735	0.23	+1.8
3,401,385	+		RR42_RS15735	0.23	+1.8
3,401,405	-		RR42_RS15735	0.24	+1.2
3,401,556	+		RR42_RS15735	0.37	+0.4
3,401,557	-		RR42_RS15735	0.38	+0.5
3,401,557	-		RR42_RS15735	0.38	+2.1
3,401,584	-		RR42_RS15735	0.40	+1.8
3,401,586	+		RR42_RS15735	0.40	+1.6
3,401,587	-		RR42_RS15735	0.40	+1.9
3,401,587	-		RR42_RS15735	0.40	+1.6
3,401,785	+		RR42_RS15735	0.57	+1.3
3,401,786	-		RR42_RS15735	0.57	+0.3
3,401,979	-		RR42_RS15735	0.74	+0.6
3,402,040	+		RR42_RS15735	0.79	+1.5
3,402,040	+		RR42_RS15735	0.79	+1.5
3,402,041	-		RR42_RS15735	0.79	+1.1
3,402,126	-		RR42_RS15735	0.87	+1.0
3,402,126	-		RR42_RS15735	0.87	+3.1
3,402,269	-				+1.4
3,402,269	-				+3.0
3,402,280	+				+1.6
3,402,281	-				-1.1
3,402,281	-				+0.3
3,402,299	-				-0.2
3,402,312	-				+0.2
3,402,478	+				+1.0
3,402,586	-		RR42_RS15740	0.20	+1.2
3,402,630	-		RR42_RS15740	0.29	+0.9
3,402,714	+		RR42_RS15740	0.47	+1.4
3,402,929	-				-0.5
3,403,004	-				+0.6
3,403,004	-				+0.9
3,403,011	-				+0.9
3,403,019	+				+0.3
3,403,019	+				+1.0
3,403,019	+				+1.3
3,403,019	+				+1.1
3,403,020	-				-0.4
3,403,020	-				-0.1
3,403,020	-				+0.9
3,403,020	-				+1.9
3,403,121	+				+1.0
3,403,192	+		RR42_RS15745	0.13	+1.5