Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS14035
Experiment: Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source Deoxyribonucleic from herring sperm 10 mg/mL |
---|---|---|---|---|---|
remove | |||||
3,020,443 | - | +1.4 | |||
3,020,457 | - | +0.7 | |||
3,020,519 | - | -1.1 | |||
3,020,577 | - | RR42_RS14030 | 0.13 | +0.1 | |
3,020,578 | + | RR42_RS14030 | 0.13 | +1.5 | |
3,020,579 | - | RR42_RS14030 | 0.14 | +0.4 | |
3,020,677 | + | RR42_RS14030 | 0.25 | -0.0 | |
3,020,683 | + | RR42_RS14030 | 0.25 | -0.4 | |
3,020,683 | + | RR42_RS14030 | 0.25 | -0.5 | |
3,020,834 | - | RR42_RS14030 | 0.43 | -0.2 | |
3,020,891 | - | RR42_RS14030 | 0.49 | +0.1 | |
3,021,024 | + | RR42_RS14030 | 0.64 | -1.2 | |
3,023,055 | - | +0.3 | |||
3,023,059 | - | +0.6 | |||
3,023,082 | - | RR42_RS14045 | 0.13 | -0.2 | |
3,023,082 | - | RR42_RS14045 | 0.13 | +0.4 | |
3,023,084 | - | RR42_RS14045 | 0.14 | -0.9 | |
3,023,179 | - | RR42_RS14045 | 0.40 | -1.9 |
Or see this region's nucleotide sequence