Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS13010

Experiment: Carbon source Deoxyribonucleic from herring sperm 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
2,799,444	+				+0.3
2,799,444	+				+0.8
2,799,444	+				-2.8
2,799,445	-				-1.6
2,799,445	-				+0.4
2,799,615	+		RR42_RS13005	0.11	-1.8
2,799,616	-		RR42_RS13005	0.11	+0.4
2,799,616	-		RR42_RS13005	0.11	+0.0
2,799,840	+		RR42_RS13005	0.38	-0.1
2,799,841	-		RR42_RS13005	0.38	-1.0
2,799,847	+		RR42_RS13005	0.38	-0.8
2,799,847	+		RR42_RS13005	0.38	+0.5
2,799,939	+		RR42_RS13005	0.49	-1.0
2,799,940	-		RR42_RS13005	0.50	+1.0
2,799,940	-		RR42_RS13005	0.50	-0.2
2,799,940	-		RR42_RS13005	0.50	-0.1
2,800,239	+		RR42_RS13005	0.85	-0.2
2,800,297	+				-0.0
2,800,297	+				-1.2
2,800,297	+				+0.1
2,800,297	+				+1.1
2,800,298	-				+0.4
2,800,298	-				+0.0
2,800,298	-				-1.0
2,800,298	-				-0.8
2,800,394	+				-1.1
2,800,395	-				+0.0
2,800,536	+		RR42_RS13010	0.19	+0.1
2,800,536	+		RR42_RS13010	0.19	+0.0
2,800,537	-		RR42_RS13010	0.19	+0.8
2,800,537	-		RR42_RS13010	0.19	+0.7
2,800,537	-		RR42_RS13010	0.19	+1.0
2,800,537	-		RR42_RS13010	0.19	+0.6
2,800,722	+		RR42_RS13010	0.40	-2.4
2,800,722	+		RR42_RS13010	0.40	+0.8
2,800,722	+		RR42_RS13010	0.40	+0.4
2,800,723	-		RR42_RS13010	0.40	+0.4
2,800,902	+		RR42_RS13010	0.60	-0.2
2,800,951	+		RR42_RS13010	0.66	-1.2
2,801,179	+				-1.4
2,801,180	-				+0.7
2,801,180	-				+0.0
2,801,225	+				+0.5
2,801,239	+				-0.2
2,801,289	+				+0.3
2,801,290	-				+0.7
2,801,302	-				-0.5
2,801,444	+				+2.6
2,801,529	-		RR42_RS13015	0.12	+0.4
2,801,532	-		RR42_RS13015	0.12	+0.1
2,801,532	-		RR42_RS13015	0.12	-0.4
2,801,591	+		RR42_RS13015	0.18	+1.1
2,801,771	+		RR42_RS13015	0.37	+1.5
2,801,921	+		RR42_RS13015	0.52	+2.1
2,801,925	+		RR42_RS13015	0.53	+2.2
2,801,925	+		RR42_RS13015	0.53	+0.9
2,801,926	-		RR42_RS13015	0.53	+0.9
2,801,942	+		RR42_RS13015	0.54	+1.7
2,801,976	-		RR42_RS13015	0.58	-0.2
2,802,144	-		RR42_RS13015	0.75	+2.4