Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS12165

Experiment: Carbon source Deoxyribonucleic from herring sperm 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
2,615,145	-		RR42_RS12160	0.81	-0.7
2,615,195	+		RR42_RS12160	0.83	-0.8
2,615,196	-		RR42_RS12160	0.83	-0.6
2,615,222	+		RR42_RS12160	0.84	+0.3
2,615,223	-		RR42_RS12160	0.84	-2.0
2,615,223	-		RR42_RS12160	0.84	+3.7
2,615,223	-		RR42_RS12160	0.84	+0.6
2,615,223	-		RR42_RS12160	0.84	+0.4
2,615,225	+		RR42_RS12160	0.84	-2.7
2,615,243	+		RR42_RS12160	0.85	-1.3
2,615,244	-		RR42_RS12160	0.85	-1.6
2,615,291	+		RR42_RS12160	0.87	+0.6
2,615,291	+		RR42_RS12160	0.87	+0.7
2,615,291	+		RR42_RS12160	0.87	+0.8
2,615,291	+		RR42_RS12160	0.87	-2.2
2,615,292	-		RR42_RS12160	0.87	+0.7
2,615,292	-		RR42_RS12160	0.87	-0.2
2,615,292	-		RR42_RS12160	0.87	+0.9
2,615,292	-		RR42_RS12160	0.87	+0.7
2,615,411	+				+0.7
2,615,412	-				+0.1
2,615,504	+				+1.1
2,615,504	+				+0.8
2,615,505	-				+0.4
2,615,505	-				-2.5
2,615,585	+				-2.7
2,615,586	-				-0.4
2,615,586	-				+0.4
2,615,981	+				+0.7
2,615,981	+				-1.2
2,615,981	+				+1.0
2,616,247	+		RR42_RS12165	0.14	-1.2
2,616,248	-		RR42_RS12165	0.14	-0.0
2,616,342	-		RR42_RS12165	0.26	-0.0
2,616,342	-		RR42_RS12165	0.26	+1.0
2,616,342	-		RR42_RS12165	0.26	+0.6
2,616,344	+		RR42_RS12165	0.26	-1.0
2,616,345	-		RR42_RS12165	0.26	+0.4
2,616,351	+		RR42_RS12165	0.27	+0.6
2,616,352	-		RR42_RS12165	0.27	+0.6
2,616,547	+		RR42_RS12165	0.53	-0.4
2,616,608	+		RR42_RS12165	0.61	+0.1
2,616,608	+		RR42_RS12165	0.61	-2.0
2,616,609	-		RR42_RS12165	0.61	-3.8
2,616,609	-		RR42_RS12165	0.61	-3.4
2,616,609	-		RR42_RS12165	0.61	+0.7
2,616,766	+		RR42_RS12165	0.81	+0.1
2,616,814	+		RR42_RS12165	0.88	-1.0
2,616,814	+		RR42_RS12165	0.88	-1.0
2,616,942	-				+2.6
2,616,942	-				-0.2
2,616,945	-				-0.2
2,616,975	+				+0.3
2,617,025	+		RR42_RS12170	0.14	+0.8
2,617,025	+		RR42_RS12170	0.14	-3.0
2,617,025	+		RR42_RS12170	0.14	-0.3
2,617,026	-		RR42_RS12170	0.15	+1.0
2,617,210	-		RR42_RS12170	0.46	+1.7
2,617,236	+		RR42_RS12170	0.50	-0.2
2,617,384	-		RR42_RS12170	0.76	+0.4
2,617,497	+				+0.4
2,617,497	+				+1.3
2,617,497	+				+0.2
2,617,498	-				-0.0
2,617,500	+				+0.3
2,617,518	+				-1.8
2,617,550	-				-1.6
2,617,550	-				-0.4
2,617,550	-				+0.2
2,617,574	+				+1.0
2,617,594	+				-0.4
2,617,722	+				+0.2
2,617,741	+				-0.1
2,617,881	+				-0.3
2,617,882	-				-0.4