Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11985

Experiment: Carbon source Deoxyribonucleic from herring sperm 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
2,566,694	+		RR42_RS11980	0.26	+1.3
2,566,784	+		RR42_RS11980	0.36	-0.2
2,566,784	+		RR42_RS11980	0.36	-0.5
2,566,785	-		RR42_RS11980	0.36	-1.3
2,566,809	+		RR42_RS11980	0.39	-0.5
2,566,810	-		RR42_RS11980	0.39	+0.6
2,566,983	-		RR42_RS11980	0.58	+0.5
2,566,983	-		RR42_RS11980	0.58	+1.1
2,566,983	-		RR42_RS11980	0.58	-1.0
2,567,181	-		RR42_RS11980	0.79	+0.7
2,567,359	+				-3.4
2,567,384	-				-0.4
2,567,384	-				-0.3
2,567,384	-				-1.9
2,567,388	-				-0.7
2,567,389	+				+1.4
2,567,390	-				-1.2
2,567,785	+		RR42_RS11985	0.44	+0.4
2,567,785	+		RR42_RS11985	0.44	+0.8
2,567,785	+		RR42_RS11985	0.44	-0.0
2,567,786	-		RR42_RS11985	0.44	+0.2
2,567,799	-		RR42_RS11985	0.45	-0.0
2,568,318	+				+0.2
2,568,460	-				+0.0
2,568,511	-				-0.4
2,568,540	+				-1.6
2,568,540	+				-1.5
2,568,540	+				+1.0
2,568,541	-				-0.3
2,568,541	-				-0.8
2,568,609	+				+1.3
2,568,641	-		RR42_RS11990	0.12	-3.7
2,568,685	-		RR42_RS11990	0.15	-0.6
2,568,685	-		RR42_RS11990	0.15	-0.7
2,568,780	-		RR42_RS11990	0.21	-2.5
2,568,780	-		RR42_RS11990	0.21	-0.8
2,568,780	-		RR42_RS11990	0.21	+0.1
2,568,783	+		RR42_RS11990	0.21	+3.0
2,568,783	+		RR42_RS11990	0.21	+1.5
2,568,783	+		RR42_RS11990	0.21	+0.2
2,568,783	+		RR42_RS11990	0.21	+1.0
2,568,784	-		RR42_RS11990	0.21	-0.1
2,568,784	-		RR42_RS11990	0.21	-0.4
2,568,784	-		RR42_RS11990	0.21	-1.8
2,568,786	+		RR42_RS11990	0.21	+1.3
2,568,787	-		RR42_RS11990	0.21	+0.5
2,568,787	-		RR42_RS11990	0.21	+0.3
2,568,854	+		RR42_RS11990	0.26	+1.9
2,568,940	-		RR42_RS11990	0.31	-1.0
2,569,018	-		RR42_RS11990	0.36	-1.5
2,569,018	-		RR42_RS11990	0.36	-1.3
2,569,018	-		RR42_RS11990	0.36	-0.3
2,569,131	+		RR42_RS11990	0.43	-1.5
2,569,131	+		RR42_RS11990	0.43	-1.2
2,569,132	-		RR42_RS11990	0.44	+0.3