Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11675

Experiment: Carbon source Deoxyribonucleic from herring sperm 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
2,499,309	-		RR42_RS11670	0.38	+0.5
2,499,398	+		RR42_RS11670	0.44	-0.4
2,499,398	+		RR42_RS11670	0.44	-0.2
2,499,398	+		RR42_RS11670	0.44	+1.0
2,499,399	-		RR42_RS11670	0.44	-1.1
2,499,464	+		RR42_RS11670	0.48	-0.8
2,499,507	-		RR42_RS11670	0.51	+1.2
2,499,507	-		RR42_RS11670	0.51	+1.0
2,499,507	-		RR42_RS11670	0.51	-0.2
2,499,723	+		RR42_RS11670	0.65	-0.0
2,500,527	+		RR42_RS11675	0.30	-0.3
2,500,528	-		RR42_RS11675	0.31	-0.5
2,500,528	-		RR42_RS11675	0.31	-0.2
2,500,528	-		RR42_RS11675	0.31	+0.8
2,500,528	-		RR42_RS11675	0.31	-0.4
2,500,528	-		RR42_RS11675	0.31	-0.3
2,500,665	+		RR42_RS11675	0.46	-2.9
2,500,665	+		RR42_RS11675	0.46	-1.5
2,500,665	+		RR42_RS11675	0.46	+0.7
2,500,665	+		RR42_RS11675	0.46	-0.8
2,500,665	+		RR42_RS11675	0.46	+0.6
2,500,666	-		RR42_RS11675	0.46	-0.9
2,500,666	-		RR42_RS11675	0.46	-0.9
2,500,813	+		RR42_RS11675	0.62	+1.2
2,500,814	-		RR42_RS11675	0.62	-0.5
2,500,814	-		RR42_RS11675	0.62	-0.0
2,500,824	-		RR42_RS11675	0.64	-0.3
2,500,824	-		RR42_RS11675	0.64	-0.8
2,500,824	-		RR42_RS11675	0.64	+0.2
2,501,225	+				-1.0
2,501,225	+				-0.8
2,501,233	-				+0.2
2,501,437	-		RR42_RS11680	0.35	+0.4
2,501,579	+		RR42_RS11680	0.86	-0.0
2,501,580	-		RR42_RS11680	0.86	-1.2
2,501,580	-		RR42_RS11680	0.86	-0.4
2,501,614	+				+1.0
2,501,617	-				-0.6
2,501,650	+				+1.7
2,501,693	-				+0.1
2,501,693	-				-1.0
2,501,755	+				+0.3
2,501,756	-				-2.0
2,501,979	-				-0.1
2,501,979	-				-1.2
2,501,979	-				-0.2
2,502,060	-				+0.6
2,502,064	-				-1.9