Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11560

Experiment: Carbon source Deoxyribonucleic from herring sperm 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
2,471,535	-		RR42_RS11555	0.23	-1.1
2,471,535	-		RR42_RS11555	0.23	-1.1
2,471,645	+		RR42_RS11555	0.35	-1.0
2,471,645	+		RR42_RS11555	0.35	-3.0
2,471,720	-		RR42_RS11555	0.43	-0.7
2,471,922	+		RR42_RS11555	0.65	+0.7
2,471,999	+		RR42_RS11555	0.73	-0.6
2,471,999	+		RR42_RS11555	0.73	+0.9
2,472,000	-		RR42_RS11555	0.73	-1.4
2,472,000	-		RR42_RS11555	0.73	-1.1
2,472,040	+		RR42_RS11555	0.77	+0.7
2,472,069	-		RR42_RS11555	0.81	+0.6
2,472,162	-				+0.9
2,472,162	-				-0.2
2,472,162	-				+1.1
2,472,246	-				-0.1
2,472,246	-				-0.1
2,472,276	-				+0.8
2,472,276	-				-0.8
2,472,313	+				-0.4
2,472,358	+				-0.7
2,472,359	-				-0.5
2,472,359	-				+0.3
2,472,368	+				-0.1
2,472,369	-				-0.1
2,472,613	+		RR42_RS11560	0.12	-0.9
2,472,613	+		RR42_RS11560	0.12	-0.1
2,472,647	-		RR42_RS11560	0.13	-0.3
2,472,733	-		RR42_RS11560	0.17	-0.2
2,472,733	-		RR42_RS11560	0.17	-1.2
2,472,749	+		RR42_RS11560	0.18	+1.4
2,472,793	+		RR42_RS11560	0.20	+1.1
2,472,931	+		RR42_RS11560	0.26	+0.6
2,472,931	+		RR42_RS11560	0.26	+0.9
2,472,989	-		RR42_RS11560	0.29	+1.2
2,473,000	+		RR42_RS11560	0.29	+1.6
2,473,000	+		RR42_RS11560	0.29	+0.5
2,473,000	+		RR42_RS11560	0.29	+0.6
2,473,001	-		RR42_RS11560	0.29	-0.7
2,473,001	-		RR42_RS11560	0.29	+1.3
2,473,001	-		RR42_RS11560	0.29	+1.0
2,473,445	-		RR42_RS11560	0.49	-1.1
2,473,621	+		RR42_RS11560	0.57	+1.2
2,473,621	+		RR42_RS11560	0.57	+0.2
2,473,622	-		RR42_RS11560	0.57	+0.0
2,473,651	+		RR42_RS11560	0.59	+1.1
2,473,651	+		RR42_RS11560	0.59	-0.4
2,473,651	+		RR42_RS11560	0.59	+0.4
2,473,651	+		RR42_RS11560	0.59	+0.5
2,473,652	-		RR42_RS11560	0.59	-0.9
2,473,677	+		RR42_RS11560	0.60	-0.2
2,473,678	-		RR42_RS11560	0.60	-1.5
2,473,699	+		RR42_RS11560	0.61	-0.3
2,473,699	+		RR42_RS11560	0.61	+0.9
2,473,700	-		RR42_RS11560	0.61	+1.4
2,473,700	-		RR42_RS11560	0.61	+0.2
2,473,735	+		RR42_RS11560	0.62	+0.8
2,473,736	-		RR42_RS11560	0.63	+0.3
2,473,953	-		RR42_RS11560	0.72	+0.2
2,473,982	+		RR42_RS11560	0.74	-1.5
2,473,983	-		RR42_RS11560	0.74	+0.8
2,474,067	-		RR42_RS11560	0.78	-0.7
2,474,109	-		RR42_RS11560	0.79	+0.7
2,474,110	+		RR42_RS11560	0.80	-1.1
2,474,111	-		RR42_RS11560	0.80	+0.1
2,474,111	-		RR42_RS11560	0.80	-0.0
2,474,111	-		RR42_RS11560	0.80	-0.8
2,474,111	-		RR42_RS11560	0.80	+0.1
2,474,382	+				+0.9
2,474,389	+				+0.7
2,474,389	+				-2.1
2,474,390	-				+1.3
2,474,471	+				-0.2
2,474,534	+				+0.2
2,474,534	+				+0.8
2,474,535	-				+0.9
2,474,671	-				+0.2
2,474,751	-				-1.8
2,474,996	-				+0.2
2,475,131	-				-0.1
2,475,347	+				-2.8
2,475,482	-				-0.2
2,475,482	-				-1.7
2,475,496	+		RR42_RS11565	0.10	+0.3
2,475,496	+		RR42_RS11565	0.10	-1.4