Experiment: Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS11370 and RR42_RS11375 are separated by 244 nucleotides RR42_RS11375 and RR42_RS11380 are separated by 113 nucleotides RR42_RS11380 and RR42_RS11385 are separated by 76 nucleotides
RR42_RS11370: RR42_RS11370 - ABC transporter ATP-binding protein, at 2,434,745 to 2,436,355
_RS11370
RR42_RS11375: RR42_RS11375 - peptidase S66, at 2,436,600 to 2,437,574
_RS11375
RR42_RS11380: RR42_RS11380 - hypothetical protein, at 2,437,688 to 2,438,197
_RS11380
RR42_RS11385: RR42_RS11385 - 6-carboxy-5,6,7,8-tetrahydropterin synthase, at 2,438,274 to 2,438,750
_RS11385
Position (kb)
2436
2437
2438 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2435.638 kb on - strand, within RR42_RS11370 at 2435.638 kb on - strand, within RR42_RS11370 at 2435.638 kb on - strand, within RR42_RS11370 at 2435.646 kb on + strand, within RR42_RS11370 at 2435.647 kb on - strand, within RR42_RS11370 at 2435.647 kb on - strand, within RR42_RS11370 at 2435.676 kb on + strand, within RR42_RS11370 at 2435.677 kb on - strand, within RR42_RS11370 at 2435.677 kb on - strand, within RR42_RS11370 at 2435.803 kb on + strand, within RR42_RS11370 at 2435.980 kb on - strand, within RR42_RS11370 at 2435.989 kb on - strand, within RR42_RS11370 at 2436.018 kb on + strand, within RR42_RS11370 at 2436.018 kb on + strand, within RR42_RS11370 at 2436.019 kb on - strand, within RR42_RS11370 at 2436.019 kb on - strand, within RR42_RS11370 at 2436.048 kb on + strand, within RR42_RS11370 at 2436.129 kb on + strand, within RR42_RS11370 at 2436.129 kb on + strand, within RR42_RS11370 at 2436.267 kb on + strand at 2436.298 kb on + strand at 2436.346 kb on + strand at 2436.369 kb on + strand at 2436.369 kb on + strand at 2436.369 kb on + strand at 2436.369 kb on + strand at 2436.369 kb on + strand at 2436.369 kb on + strand at 2436.369 kb on + strand at 2436.369 kb on + strand at 2436.369 kb on + strand at 2436.370 kb on - strand at 2436.370 kb on - strand at 2436.370 kb on - strand at 2436.370 kb on - strand at 2436.449 kb on + strand at 2436.449 kb on + strand at 2436.594 kb on + strand at 2437.673 kb on + strand at 2437.674 kb on - strand at 2437.685 kb on + strand at 2437.685 kb on + strand at 2437.686 kb on - strand at 2437.686 kb on - strand at 2437.686 kb on - strand at 2438.167 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Deoxyribonucleic from herring sperm 10 mg/mL remove 2,435,638 - RR42_RS11370 0.55 -0.7 2,435,638 - RR42_RS11370 0.55 +1.1 2,435,638 - RR42_RS11370 0.55 +0.9 2,435,646 + RR42_RS11370 0.56 -1.4 2,435,647 - RR42_RS11370 0.56 -3.3 2,435,647 - RR42_RS11370 0.56 +0.2 2,435,676 + RR42_RS11370 0.58 +0.3 2,435,677 - RR42_RS11370 0.58 -0.0 2,435,677 - RR42_RS11370 0.58 -1.4 2,435,803 + RR42_RS11370 0.66 +1.6 2,435,980 - RR42_RS11370 0.77 -0.7 2,435,989 - RR42_RS11370 0.77 -0.4 2,436,018 + RR42_RS11370 0.79 +0.3 2,436,018 + RR42_RS11370 0.79 +1.2 2,436,019 - RR42_RS11370 0.79 +0.3 2,436,019 - RR42_RS11370 0.79 +0.8 2,436,048 + RR42_RS11370 0.81 +0.7 2,436,129 + RR42_RS11370 0.86 +0.3 2,436,129 + RR42_RS11370 0.86 -1.1 2,436,267 + +0.3 2,436,298 + -0.5 2,436,346 + -1.7 2,436,369 + -0.5 2,436,369 + -0.1 2,436,369 + +0.1 2,436,369 + -1.3 2,436,369 + +0.8 2,436,369 + +0.4 2,436,369 + +0.5 2,436,369 + -0.1 2,436,369 + +0.4 2,436,370 - -0.1 2,436,370 - -0.2 2,436,370 - +0.9 2,436,370 - -0.3 2,436,449 + -0.7 2,436,449 + +1.2 2,436,594 + +0.0 2,437,673 + +0.2 2,437,674 - +2.7 2,437,685 + +1.0 2,437,685 + +2.4 2,437,686 - +0.1 2,437,686 - +0.9 2,437,686 - +0.4 2,438,167 - -3.2
Or see this region's nucleotide sequence