Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS11085

Experiment: Carbon source Deoxyribonucleic from herring sperm 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
2,364,032	+		RR42_RS11075	0.71	+0.3
2,364,033	-		RR42_RS11075	0.71	-2.2
2,364,287	+		RR42_RS11075	0.84	+0.3
2,364,288	-		RR42_RS11075	0.85	+1.0
2,364,408	+				+0.0
2,364,530	+				+0.4
2,364,530	+				-0.1
2,364,713	-				+0.0
2,364,718	+				-0.1
2,364,829	+		RR42_RS11080	0.33	-1.1
2,364,830	-		RR42_RS11080	0.34	+1.1
2,364,830	-		RR42_RS11080	0.34	-0.8
2,364,841	+		RR42_RS11080	0.41	+0.4
2,365,033	-				-0.7
2,365,098	+		RR42_RS11085	0.11	+0.8
2,365,173	+		RR42_RS11085	0.17	+0.9
2,365,672	-		RR42_RS11085	0.60	+0.9
2,365,713	+		RR42_RS11085	0.63	+0.2
2,365,949	-		RR42_RS11085	0.83	-0.4
2,366,113	+				+0.6
2,366,161	+				+0.2
2,366,162	-				-1.3
2,366,171	-				-1.0
2,366,217	+				-0.3
2,366,218	-				+0.2
2,366,218	-				+0.8
2,366,442	-		RR42_RS11090	0.26	-0.3
2,366,547	-		RR42_RS11090	0.43	-3.4
2,366,550	+		RR42_RS11090	0.43	-1.1
2,366,551	-		RR42_RS11090	0.43	-0.1
2,366,916	+				+0.4
2,366,916	+				-0.9
2,367,076	-				+0.6
2,367,076	-				+0.1
2,367,088	-				-0.1
2,367,135	+				+0.7