Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS09250

Experiment: Carbon source Deoxyribonucleic from herring sperm 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
1,954,081	-				+1.3
1,954,413	+		RR42_RS09240	0.74	-2.4
1,954,414	-		RR42_RS09240	0.74	-1.3
1,954,518	-				-1.7
1,954,518	-				+0.9
1,954,532	-				+0.4
1,954,607	+				+0.6
1,954,668	+				-0.2
1,954,695	+		RR42_RS09245	0.14	+1.1
1,954,803	-		RR42_RS09245	0.67	-0.7
1,954,942	+				+0.9
1,954,942	+				+0.1
1,954,943	-				-0.0
1,954,943	-				+0.7
1,955,078	+				-0.1
1,955,078	+				+0.8
1,955,078	+				-1.2
1,955,078	+				-0.0
1,955,079	-				-0.3
1,955,079	-				-0.9
1,955,102	+				-0.5
1,955,103	-				+1.2
1,955,136	+		RR42_RS09250	0.18	+0.8
1,955,136	+		RR42_RS09250	0.18	-1.1
1,955,136	+		RR42_RS09250	0.18	-0.3
1,955,137	-		RR42_RS09250	0.19	-0.5
1,955,137	-		RR42_RS09250	0.19	-0.8
1,955,137	-		RR42_RS09250	0.19	+0.1
1,955,137	-		RR42_RS09250	0.19	+0.1
1,955,138	+		RR42_RS09250	0.19	+0.4
1,955,138	+		RR42_RS09250	0.19	-1.6
1,955,138	+		RR42_RS09250	0.19	-1.2
1,955,174	+		RR42_RS09250	0.30	+1.0
1,955,274	+		RR42_RS09250	0.61	-0.3
1,955,277	-		RR42_RS09250	0.62	+0.2
1,955,312	+		RR42_RS09250	0.73	-1.7
1,955,313	-		RR42_RS09250	0.73	+0.6
1,955,313	-		RR42_RS09250	0.73	+0.4
1,955,313	-		RR42_RS09250	0.73	+1.1
1,955,313	-		RR42_RS09250	0.73	+0.1
1,955,339	+		RR42_RS09250	0.81	-0.3
1,955,339	+		RR42_RS09250	0.81	-2.3
1,955,339	+		RR42_RS09250	0.81	+1.1
1,955,340	-		RR42_RS09250	0.81	-1.2
1,955,374	+				+0.6
1,955,374	+				+0.6
1,955,374	+				+0.3
1,955,416	+				+1.2
1,955,416	+				-0.7
1,955,416	+				-0.3
1,955,417	-				+0.4
1,955,474	+				-0.7
1,955,474	+				+0.9
1,955,474	+				-0.3
1,955,475	-				+1.2
1,955,584	+				+0.4
1,955,584	+				+0.2
1,955,585	-				+0.2
1,955,585	-				+0.2
1,955,610	+				-0.1
1,955,611	-				+0.6
1,955,633	+				+0.7
1,955,637	-				+0.2
1,955,646	+				+0.1
1,955,806	+				-2.1
1,955,807	-				+1.2
1,956,197	+		RR42_RS09255	0.24	+0.2
1,956,379	+		RR42_RS09255	0.59	-1.7
1,956,379	+		RR42_RS09255	0.59	-1.9