Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS08405

Experiment: Carbon source Deoxyribonucleic from herring sperm 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
1,774,781	+		RR42_RS08395	0.43	-0.2
1,774,781	+		RR42_RS08395	0.43	+1.5
1,774,882	-		RR42_RS08395	0.54	-0.6
1,774,897	+		RR42_RS08395	0.56	-1.1
1,774,898	-		RR42_RS08395	0.56	-0.5
1,774,898	-		RR42_RS08395	0.56	+0.7
1,774,901	+		RR42_RS08395	0.56	+0.5
1,774,901	+		RR42_RS08395	0.56	-1.5
1,774,902	-		RR42_RS08395	0.56	-1.7
1,774,947	-		RR42_RS08395	0.61	-0.8
1,774,947	-		RR42_RS08395	0.61	-1.5
1,774,959	+		RR42_RS08395	0.63	+0.6
1,774,962	+		RR42_RS08395	0.63	-0.0
1,774,963	-		RR42_RS08395	0.63	-0.1
1,774,963	-		RR42_RS08395	0.63	+0.3
1,775,002	+		RR42_RS08395	0.67	-0.1
1,775,002	+		RR42_RS08395	0.67	-0.0
1,775,003	-		RR42_RS08395	0.67	-0.2
1,775,023	-		RR42_RS08395	0.70	-0.9
1,775,023	-		RR42_RS08395	0.70	+0.1
1,775,054	+		RR42_RS08395	0.73	-1.3
1,775,054	+		RR42_RS08395	0.73	-3.8
1,775,059	-		RR42_RS08395	0.73	+0.2
1,775,194	+		RR42_RS08395	0.88	-0.8
1,775,195	-		RR42_RS08395	0.88	+1.1
1,775,195	-		RR42_RS08395	0.88	-0.3
1,775,249	-				-0.1
1,775,249	-				-1.9
1,775,300	-				-0.1
1,775,401	+		RR42_RS08400	0.12	-0.1
1,775,481	-		RR42_RS08400	0.32	-2.6
1,775,481	-		RR42_RS08400	0.32	-0.5
1,775,560	-		RR42_RS08400	0.52	-0.7
1,776,055	+		RR42_RS08405	0.57	+1.3
1,776,056	-		RR42_RS08405	0.57	+0.2
1,776,056	-		RR42_RS08405	0.57	-1.3
1,776,149	-		RR42_RS08405	0.74	+0.3
1,776,286	+				-0.3
1,776,686	+		RR42_RS08410	0.65	-0.2
1,776,687	-		RR42_RS08410	0.65	-0.3
1,776,687	-		RR42_RS08410	0.65	-1.6
1,776,800	+		RR42_RS08410	0.88	-1.4
1,776,800	+		RR42_RS08410	0.88	-2.5
1,776,801	-		RR42_RS08410	0.88	-0.2
1,776,963	+		RR42_RS08415	0.27	-0.3
1,777,116	+		RR42_RS08415	0.63	+1.0
1,777,164	+		RR42_RS08415	0.75	+0.1
1,777,164	+		RR42_RS08415	0.75	+0.5
1,777,164	+		RR42_RS08415	0.75	-0.1
1,777,165	-		RR42_RS08415	0.75	-0.2
1,777,267	+				+1.9
1,777,267	+				+0.2
1,777,267	+				+0.2
1,777,267	+				-1.1
1,777,268	-				-0.3