Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS05110
Experiment: Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source Deoxyribonucleic from herring sperm 10 mg/mL |
---|---|---|---|---|---|
remove | |||||
1,127,608 | + | -0.1 | |||
1,127,608 | + | -0.7 | |||
1,127,788 | + | RR42_RS05110 | 0.15 | -0.6 | |
1,127,924 | - | RR42_RS05110 | 0.24 | -1.0 | |
1,128,057 | - | RR42_RS05110 | 0.33 | +0.2 | |
1,128,619 | + | RR42_RS05110 | 0.71 | -0.7 | |
1,128,620 | - | RR42_RS05110 | 0.71 | -0.4 | |
1,128,658 | + | RR42_RS05110 | 0.74 | +0.3 | |
1,128,660 | + | RR42_RS05110 | 0.74 | -1.1 | |
1,128,660 | + | RR42_RS05110 | 0.74 | -0.4 | |
1,128,661 | - | RR42_RS05110 | 0.74 | +0.0 | |
1,128,847 | - | RR42_RS05110 | 0.87 | +1.7 | |
1,129,097 | + | -0.7 | |||
1,129,098 | - | -0.5 | |||
1,129,098 | - | -0.2 | |||
1,129,098 | - | +0.4 | |||
1,129,100 | - | -1.1 | |||
1,129,100 | - | -1.1 | |||
1,129,123 | + | +1.1 | |||
1,129,629 | - | RR42_RS05115 | 0.45 | -0.5 | |
1,129,888 | + | RR42_RS05115 | 0.71 | -2.2 | |
1,129,889 | - | RR42_RS05115 | 0.71 | +0.3 |
Or see this region's nucleotide sequence