Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS03135

Experiment: Carbon source Deoxyribonucleic from herring sperm 10 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 10 mg/mL
691,379	+				+0.2
691,430	+				-1.3
691,481	+				+0.5
691,498	-				-3.0
691,778	+				+0.1
691,778	+				+0.6
691,778	+				+0.6
691,868	+		RR42_RS03130	0.23	+1.0
691,869	-		RR42_RS03130	0.24	-0.3
692,102	+		RR42_RS03130	0.83	-0.9
692,102	+		RR42_RS03130	0.83	+0.1
692,103	-		RR42_RS03130	0.84	-1.5
692,182	-				-0.6
692,193	+				-0.4
692,193	+				+1.3
692,193	+				-1.7
692,194	-				+0.4
692,202	+				-0.2
692,203	-				-0.4
692,203	-				-0.2
692,203	-				+0.1
692,203	-				-1.3
692,280	+		RR42_RS03135	0.17	+2.8
692,305	+		RR42_RS03135	0.21	+0.3
692,359	+		RR42_RS03135	0.30	-2.0
692,360	-		RR42_RS03135	0.30	-1.8
692,361	+		RR42_RS03135	0.30	-0.7
692,361	+		RR42_RS03135	0.30	-0.1
692,361	+		RR42_RS03135	0.30	+1.7
692,361	+		RR42_RS03135	0.30	-0.1
692,362	-		RR42_RS03135	0.30	+0.3
692,362	-		RR42_RS03135	0.30	+1.3
692,368	-		RR42_RS03135	0.31	-1.7
692,505	+		RR42_RS03135	0.54	+0.2
692,528	+		RR42_RS03135	0.58	+1.7
692,528	+		RR42_RS03135	0.58	-1.3
692,529	-		RR42_RS03135	0.58	+0.8
692,533	+		RR42_RS03135	0.59	+0.3
692,534	-		RR42_RS03135	0.59	-1.5
692,534	-		RR42_RS03135	0.59	-0.8
692,534	-		RR42_RS03135	0.59	+0.6
692,534	-		RR42_RS03135	0.59	-1.0
692,534	-		RR42_RS03135	0.59	+1.3
692,534	-		RR42_RS03135	0.59	-0.1
692,534	-		RR42_RS03135	0.59	-1.9
692,537	+		RR42_RS03135	0.59	+0.3
692,537	+		RR42_RS03135	0.59	-0.2
692,537	+		RR42_RS03135	0.59	+0.7
692,537	+		RR42_RS03135	0.59	-0.4
692,538	-		RR42_RS03135	0.60	+1.6
692,538	-		RR42_RS03135	0.60	+0.8
692,549	+		RR42_RS03135	0.61	-2.7
692,549	+		RR42_RS03135	0.61	+1.1
692,767	+				-0.5
692,767	+				+1.4
692,767	+				-1.5
692,767	+				-0.7
692,768	-				+0.6
692,794	+				-0.0
692,795	-				-2.2
692,846	-				-0.5
692,846	-				-0.4
692,960	-				-0.7
692,994	-				+0.2
693,084	-				-0.2
693,101	-				+0.4
693,135	+				+0.0
693,204	-				-0.7
693,204	-				-1.2
693,204	-				-2.2
693,286	+				+1.3
693,286	+				-0.0
693,286	+				+1.3
693,287	-				+0.4
693,287	-				-1.7
693,287	-				-1.1
693,289	-				-1.7
693,366	-				-2.8
693,378	+				-1.3
693,390	-				-1.7
693,397	+				+1.1
693,397	+				+0.2
693,412	+				+2.5
693,412	+				+0.7
693,413	-				-1.7
693,465	+				+0.9
693,466	-				-2.0
693,466	-				-1.5
693,529	+				-1.7
693,529	+				-0.1
693,529	+				+0.7
693,530	-				-3.0
693,530	-				+1.9
693,530	-				-0.2
693,530	-				-1.6
693,531	+				-1.0
693,531	+				+0.3
693,531	+				+0.9
693,531	+				-1.8
693,532	-				-0.3
693,532	-				-0.7
693,532	-				-0.3
693,532	-				-1.0
693,532	-				-0.0
693,532	-				-0.3
693,532	-				-1.8
693,532	-				+1.1
693,534	-				-0.3
693,534	-				-1.6
693,534	-				-1.3
693,534	-				-0.5
693,534	-				-1.0
693,543	+				+1.3
693,544	-				-1.9
693,549	+				-0.2
693,549	+				+0.1
693,549	+				+1.3
693,549	+				+0.7
693,550	-				-3.4
693,615	-				-1.0
693,661	-				-2.0
693,684	+				-0.4
693,685	-				-0.3
693,723	-				-0.3