Experiment: MoLS4 with Putrescine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU3273 and DVU3274 overlap by 1 nucleotides DVU3274 and DVU3275 overlap by 4 nucleotides DVU3275 and DVU3276 are separated by 113 nucleotides DVU3276 and DVU3277 are separated by 82 nucleotides DVU3277 and htrA are separated by 0 nucleotides
DVU3273: DVU3273 - conserved hypothetical protein (TIGR), at 3,450,836 to 3,451,228
DVU3273
DVU3274: DVU3274 - hypothetical protein (TIGR), at 3,451,228 to 3,451,896
DVU3274
DVU3275: DVU3275 - hypothetical protein (TIGR), at 3,451,893 to 3,452,033
DVU3275
DVU3276: DVU3276 - ferredoxin I (TIGR), at 3,452,147 to 3,452,335
DVU3276
DVU3277: DVU3277 - hypothetical protein (TIGR), at 3,452,418 to 3,452,516
DVU3277
DVU3278: htrA - peptidase/PDZ domain protein (TIGR), at 3,452,517 to 3,454,073
htrA
Position (kb)
3451
3452
3453 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3450.991 kb on - strand, within DVU3273 at 3451.029 kb on - strand, within DVU3273 at 3451.160 kb on + strand, within DVU3273 at 3451.195 kb on + strand at 3451.197 kb on + strand at 3451.357 kb on - strand, within DVU3274 at 3451.368 kb on - strand, within DVU3274 at 3451.380 kb on + strand, within DVU3274 at 3452.052 kb on - strand at 3452.067 kb on + strand at 3452.442 kb on + strand, within DVU3277 at 3452.449 kb on - strand, within DVU3277 at 3452.508 kb on - strand at 3452.589 kb on - strand at 3452.618 kb on + strand at 3452.642 kb on + strand at 3452.665 kb on - strand at 3452.721 kb on - strand, within htrA at 3452.752 kb on + strand, within htrA at 3452.752 kb on + strand, within htrA at 3452.752 kb on + strand, within htrA at 3452.752 kb on + strand, within htrA at 3452.760 kb on - strand, within htrA at 3452.779 kb on + strand, within htrA at 3452.787 kb on - strand, within htrA at 3452.869 kb on + strand, within htrA at 3452.912 kb on + strand, within htrA at 3452.956 kb on - strand, within htrA at 3452.980 kb on + strand, within htrA at 3452.988 kb on - strand, within htrA at 3452.995 kb on - strand, within htrA
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with Putrescine (N) remove 3,450,991 - DVU3273 0.39 -0.1 3,451,029 - DVU3273 0.49 +0.9 3,451,160 + DVU3273 0.82 +0.2 3,451,195 + +0.4 3,451,197 + -0.0 3,451,357 - DVU3274 0.19 +0.1 3,451,368 - DVU3274 0.21 +0.2 3,451,380 + DVU3274 0.23 +0.9 3,452,052 - +0.1 3,452,067 + -0.4 3,452,442 + DVU3277 0.24 -1.6 3,452,449 - DVU3277 0.31 -2.0 3,452,508 - -0.3 3,452,589 - +2.7 3,452,618 + +0.0 3,452,642 + -1.7 3,452,665 - +0.1 3,452,721 - htrA DVU3278 0.13 -0.2 3,452,752 + htrA DVU3278 0.15 +0.1 3,452,752 + htrA DVU3278 0.15 -0.6 3,452,752 + htrA DVU3278 0.15 +0.2 3,452,752 + htrA DVU3278 0.15 +0.2 3,452,760 - htrA DVU3278 0.16 -0.2 3,452,779 + htrA DVU3278 0.17 +1.4 3,452,787 - htrA DVU3278 0.17 -1.8 3,452,869 + htrA DVU3278 0.23 -1.2 3,452,912 + htrA DVU3278 0.25 +0.6 3,452,956 - htrA DVU3278 0.28 -0.1 3,452,980 + htrA DVU3278 0.30 -0.8 3,452,988 - htrA DVU3278 0.30 -0.2 3,452,995 - htrA DVU3278 0.31 +0.9
Or see this region's nucleotide sequence