Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2099

Experiment: BG11 with Polymyxin B sulfate 0.000390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Polymyxin B sulfate 0.000390625 mg/ml
2,180,021	+		Synpcc7942_2097	0.60	-0.6
2,180,061	+		Synpcc7942_2097	0.64	-2.5
2,180,063	+		Synpcc7942_2097	0.64	-0.8
2,180,069	-		Synpcc7942_2097	0.65	-1.0
2,180,071	+		Synpcc7942_2097	0.65	-1.3
2,180,071	+		Synpcc7942_2097	0.65	-0.2
2,180,079	-		Synpcc7942_2097	0.66	+0.3
2,180,079	-		Synpcc7942_2097	0.66	-0.3
2,180,079	-		Synpcc7942_2097	0.66	-0.3
2,180,092	+		Synpcc7942_2097	0.67	+0.2
2,180,148	-		Synpcc7942_2097	0.74	-0.9
2,180,230	+		Synpcc7942_2097	0.82	-1.6
2,180,238	-		Synpcc7942_2097	0.83	+0.0
2,180,257	-		Synpcc7942_2097	0.85	-0.2
2,180,257	-		Synpcc7942_2097	0.85	+0.3
2,180,290	+		Synpcc7942_2097	0.89	+1.8
2,180,298	-		Synpcc7942_2097	0.90	+0.4
2,180,304	-				-0.0
2,180,319	+				-0.1
2,180,344	-				+0.5
2,180,423	-				+0.4
2,180,428	-				-0.6
2,180,428	-				+0.4
2,180,435	-				+0.4
2,180,462	-				-0.2
2,180,494	-				-2.9
2,180,542	+	rfbC	Synpcc7942_2098	0.15	-0.3
2,180,677	+	rfbC	Synpcc7942_2098	0.40	-1.0
2,180,685	-	rfbC	Synpcc7942_2098	0.41	-3.6
2,180,713	+	rfbC	Synpcc7942_2098	0.46	-0.3
2,180,734	+	rfbC	Synpcc7942_2098	0.50	-0.8
2,180,754	-	rfbC	Synpcc7942_2098	0.54	-1.9
2,180,793	+	rfbC	Synpcc7942_2098	0.61	-1.0
2,180,891	+	rfbC	Synpcc7942_2098	0.79	-0.3
2,180,899	-	rfbC	Synpcc7942_2098	0.80	-0.0
2,180,946	+	rfbC	Synpcc7942_2098	0.89	-1.7
2,180,954	-				-2.7
2,180,981	+				-2.3
2,181,019	+				-3.2
2,181,027	+				-1.8
2,181,037	+				-2.4
2,181,045	-				-1.8
2,181,174	-	rfbD	Synpcc7942_2099	0.19	-2.7
2,181,179	+	rfbD	Synpcc7942_2099	0.20	-0.8
2,181,207	-	rfbD	Synpcc7942_2099	0.23	-1.9
2,181,328	+	rfbD	Synpcc7942_2099	0.37	-2.0
2,181,342	-	rfbD	Synpcc7942_2099	0.39	-2.3
2,181,382	+	rfbD	Synpcc7942_2099	0.43	-1.6
2,181,449	+	rfbD	Synpcc7942_2099	0.51	-2.0
2,181,553	+	rfbD	Synpcc7942_2099	0.63	-1.3
2,181,561	-	rfbD	Synpcc7942_2099	0.64	-2.3
2,181,614	+	rfbD	Synpcc7942_2099	0.70	-2.5
2,181,622	-	rfbD	Synpcc7942_2099	0.71	-2.5
2,181,710	+	rfbD	Synpcc7942_2099	0.81	-3.2
2,181,718	-	rfbD	Synpcc7942_2099	0.82	-0.6
2,181,727	+	rfbD	Synpcc7942_2099	0.83	-2.2
2,181,763	+	rfbD	Synpcc7942_2099	0.87	-1.3
2,181,764	+	rfbD	Synpcc7942_2099	0.87	-2.6
2,181,773	+	rfbD	Synpcc7942_2099	0.88	-2.8
2,181,786	-	rfbD	Synpcc7942_2099	0.90	-2.7
2,181,815	+				-1.6
2,181,823	-				-1.6
2,181,890	-				-1.2
2,181,913	+				-0.1
2,181,921	-				-2.7
2,181,935	-				+0.8
2,182,006	-	rfbB	Synpcc7942_2100	0.13	-0.3
2,182,007	+	rfbB	Synpcc7942_2100	0.13	+0.8
2,182,015	-	rfbB	Synpcc7942_2100	0.13	+2.0
2,182,015	-	rfbB	Synpcc7942_2100	0.13	-2.2
2,182,015	-	rfbB	Synpcc7942_2100	0.13	+0.5
2,182,038	-	rfbB	Synpcc7942_2100	0.16	+0.1
2,182,053	+	rfbB	Synpcc7942_2100	0.17	-0.6
2,182,093	-	rfbB	Synpcc7942_2100	0.21	-0.8
2,182,093	-	rfbB	Synpcc7942_2100	0.21	-0.0
2,182,107	-	rfbB	Synpcc7942_2100	0.22	-1.5
2,182,152	-	rfbB	Synpcc7942_2100	0.26	-1.6
2,182,202	-	rfbB	Synpcc7942_2100	0.31	-0.2
2,182,232	+	rfbB	Synpcc7942_2100	0.34	+1.2
2,182,258	+	rfbB	Synpcc7942_2100	0.36	-0.1
2,182,271	-	rfbB	Synpcc7942_2100	0.37	-0.2
2,182,278	+	rfbB	Synpcc7942_2100	0.38	+0.9
2,182,279	+	rfbB	Synpcc7942_2100	0.38	+0.6
2,182,286	-	rfbB	Synpcc7942_2100	0.39	+0.3
2,182,287	-	rfbB	Synpcc7942_2100	0.39	+0.3
2,182,362	-	rfbB	Synpcc7942_2100	0.46	-1.5
2,182,383	+	rfbB	Synpcc7942_2100	0.48	-0.7
2,182,395	+	rfbB	Synpcc7942_2100	0.49	+1.3
2,182,403	-	rfbB	Synpcc7942_2100	0.50	-1.5
2,182,405	-	rfbB	Synpcc7942_2100	0.50	+0.6
2,182,405	-	rfbB	Synpcc7942_2100	0.50	+0.8
2,182,457	-	rfbB	Synpcc7942_2100	0.55	-0.6
2,182,475	-	rfbB	Synpcc7942_2100	0.56	-0.3
2,182,489	-	rfbB	Synpcc7942_2100	0.58	-0.7
2,182,566	-	rfbB	Synpcc7942_2100	0.65	-1.2
2,182,571	+	rfbB	Synpcc7942_2100	0.65	-0.4
2,182,584	-	rfbB	Synpcc7942_2100	0.66	+1.4
2,182,584	-	rfbB	Synpcc7942_2100	0.66	-0.2
2,182,617	-	rfbB	Synpcc7942_2100	0.69	-1.1
2,182,641	-	rfbB	Synpcc7942_2100	0.72	-2.3
2,182,762	+	rfbB	Synpcc7942_2100	0.83	+0.3